Arabidopsis thaliana (thale cress): AT4G08350
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Entry
AT4G08350 CDS
T00041
Symbol
GTA2
Name
(RefSeq) global transcription factor group A2
KO
K15172
transcription elongation factor SPT5
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
AT4G08350 (GTA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT4G08350 (GTA2)
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT4G08350 (GTA2)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AT4G08350 (GTA2)
RNA polymerase I system
AT4G08350 (GTA2)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
AT4G08350 (GTA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW
Spt5-NGN
KOW4_SPT5
KOW7_SPT5
KOW6_SPT51-2
KOW2_Spt5
KOWx_SPT5
KOW5_SPT5
Spt5_N
GPKOW_C
SH3_KIN17_C
KOW6_SPT5
DUF4438
Motif
Other DBs
NCBI-GeneID:
826391
NCBI-ProteinID:
NP_192575
TAIR:
AT4G08350
UniProt:
Q9STN3
A0A178UTQ8
LinkDB
All DBs
Position
4:5286158..5292270
Genome browser
AA seq
1041 aa
AA seq
DB search
MPRSRDEDDELDGDYEALDLEEEEEEDEEEEEERGRGGGGSRRKRGRSNFIDDYAEEDSQ
EEDDDDEDYGSSRGGKGAASKRKKPSASIFLDREAHQVDDEDEEEEDEAEDDFIVDNGTD
LPDERGDRRYERRFLPRDENDEDVEDLERRIQERFSSRHHEEYDEEATEVEQQALLPSVR
DPKLWMVKCAIGREREVAVCLMQKFIDRGADLQIRSVVALDHLKNFIYVEADKEAHVKEA
IKGMRNIYANQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNV
RQRVTVKLIPRIDLQALASKLDGREVSKKKAFVPPPRFMNIDEARELHIRVERRRDHMTG
DYFENIGGMLFKDGFHYKQVSLKSITVQNVTPTFDELEKFNKPSENGEGDFGGLSTLFAN
RKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVLIRSEVKGLPDPLAVNERELCKYFEP
GNHVKVVSGTHEGATGMVVKVDQHVLIILSDTTKEHVRVFADHVVESSEVTTGVTKIGDY
ELHDLVLLDNLSFGVIIRLENEAFQVLKGVPDRPEVALVKLREIKCKLEKKINVQDRYKN
VIAVKDDVRVIEGPSKGKQGPVKHIYKGVLFIYDRHHLEHAGFICAKCTSCIVVGGSRSG
ANRNGGDSLSRYGNFKAPAPVPSSPGRFQRGRGGGYNNSGGRHGGGRGRGDDSLLGTTVK
IRLGPFKGYRGPVVEVKGNSVRVELEMKIVTVDRGAISDNVATTPFRDTSRYSMGSETPM
HPSRTPLHPYMTPMRDSGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSP
QYQPGSPPSRAYEAPTPGSGWASTPGGSYSDAGTPRDHGSAYANAPSPYLPSTPGQPMTP
SSASYLPGTPGGQPMTPGTGLDVMSPVIGGDAEAWFMPDILVDIHKAGEDTDVGVIRDVS
DGTCKVSLGSSGEGDTIMALPSELEIIPPRKSDRVKIVGGQYRGSTGKLIGIDGSDGIVK
IDDNLDVKILDLALLAKFVQP
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaagcagagacgaagacgatgaattagacggtgactacgaagcattagattta
gaggaagaagaggaagaagacgaagaagaagaagaagagagaggaagaggtggcggcggt
tctagacggaagagaggaagatcgaattttatcgatgattatgctgaggaagattctcag
gaagaagatgatgacgatgaagattatggtagtagccgtggaggtaaaggagctgctagt
aagagaaagaagccatctgcttctattttcttagaccgagaagctcatcaagttgatgat
gaagacgaagaggaagaagatgaagcagaagatgattttattgtggataatggaacggac
cttccggatgagcgtggtgatagacggtacgaacggaggtttcttcctcgagacgaaaat
gatgaggatgtggaagatctcgagagaagaattcaagagcggttctcctctaggcatcat
gaagaatatgatgaagaagctacagaagttgagcaacaagcgcttttgccatcagtccgt
gatccgaaattgtggatggtgaaatgtgcgattggccgtgaaagggaggttgctgtttgt
cttatgcaaaaatttatagatcgaggagctgatttgcagattagatctgttgttgccctt
gaccatcttaagaattttatatatgttgaagcagacaaggaagctcatgtgaaagaggca
atcaagggcatgaggaatatatatgctaatcagaagatcttacttgtcccgataagagaa
atgacagatgttctttctgttgagagcaaagccattgatctatcacgggatacctgggtt
agaatgaaaatcgggacgtataaaggtgatcttgcaaaggtagttgatgttgataatgtg
cgtcagagggtcacagtcaagttaatcccaagaattgatctgcaggcactagccagtaag
ctggacggaagagaagtttcaaagaaaaaagcctttgttccacctccacgtttcatgaac
attgatgaagcgagggaactgcacatacgtgttgagcgtcggcgtgatcacatgactggt
gattactttgaaaatattggtggcatgcttttcaaagatgggtttcattacaaacaagta
tcattgaagtccatcactgttcagaatgttacaccaacttttgacgaacttgaaaaattc
aataaaccaagtgaaaatggagagggcgactttggtggtctgtcaacattatttgcaaac
agaaagaaaggtcatttcatgaagggtgatgcagttattgttatcaagggggatctgaaa
aacttgaagggttgggttgagaaagtagatgaagaaaatgtccttatcagatcagaagtg
aaaggtctccctgatcctcttgctgtaaatgagagagagctttgcaagtactttgaacct
ggaaatcatgtgaaggttgtctctgggacccatgaaggagcaacaggcatggttgtcaaa
gttgatcaacacgtgcttatcattctgtctgacacgaccaaagaacatgtccgagtgttt
gctgatcatgttgttgagagttcagaagtgacaactggtgttaccaaaattggggactat
gaacttcatgatcttgtgcttctggataacctgagctttggagtaattatacgactagag
aatgaagcttttcaggttcttaaaggggttcctgacagaccagaggttgctcttgtcaaa
ctcagagaaatcaaatgcaaacttgagaagaaaatcaatgttcaagatcgctacaaaaat
gtcattgctgtgaaagatgacgtcagagtgatcgagggtcctagcaaaggtaaacaaggt
cctgtaaagcatatctacaaaggagtcttatttatatatgatcgacatcaccttgagcat
gctggatttatctgcgctaaatgcacatcatgcattgttgttggtggatcacgttctggt
gctaatagaaatggtggtgattcgctttcaaggtatggcaatttcaaggcacctgcccca
gtaccctcatctccaggaagatttcaacgtggcagaggcggaggatataataactctgga
gggaggcatgggggtggaagaggacggggagacgattctttattgggtactactgttaaa
atccgtctaggacctttcaaggggtataggggacctgtagtagaagtgaaaggaaattca
gtgcgtgtagaacttgagatgaagattgtgacagttgatcggggtgcaatatcagataat
gttgcgacaacaccgtttagagatacatctcggtatagtatgggaagcgaaacacctatg
catccttcacggactccacttcatccttatatgactccaatgcgggactctggagctaca
ccaatccatgatggaatgaggacacccatgcgtgatagagcttggaatccttacacgcct
atgagtccacctagggataactgggaagatggaaatccgggatcttggggaacgagtcct
caatatcagccgggaagtcctccttcacgggcatatgaagcaccaacgcctggctcagga
tgggctagtactcctggtggtagttactcggatgcggggacacctagagaccatggttca
gcttatgctaatgccccaagtccttacctgccatcaacacctgggcaacccatgacacca
agctcggcttcatacttacctggtactcccggaggacaaccaatgactcctggaactggc
ctcgatgtcatgtctcctgttataggtggggatgctgaagcatggttcatgcccgatatt
ttggttgacatacacaaggctggagaggacaccgatgtgggcgtcatccgagatgtttcg
gatggaacgtgtaaagtgtctctcgggtccagcggtgaaggtgacactataatggccctc
ccaagcgaactggagataattcctccgaggaaatccgatcgtgtcaaaatagttggcggt
cagtatcgtgggtctacaggtaagctgatcggaatcgacgggtctgacggtatcgttaag
atagatgataatcttgacgtcaagattctggacctggccttattagccaagtttgtgcaa
ccgtga
DBGET
integrated database retrieval system
