Arabidopsis thaliana (thale cress): AT4G08920
Help
Entry
AT4G08920 CDS
T00041
Symbol
CRY1
Name
(RefSeq) cryptochrome 1
KO
K12118
cryptochrome 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
AT4G08920 (CRY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
826470
NCBI-ProteinID:
NP_567341
TAIR:
AT4G08920
UniProt:
Q43125
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:5723651..5727268
Genome browser
AA seq
681 aa
AA seq
DB search
MSGSVSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSR
WWLKNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDH
RAKDVLTAQGIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPK
KIISGDVSKCVADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRR
KADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYS
RYISFNHPYSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDR
IRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQ
FEGYKFDPNGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEA
KARLHEALSQMWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITMEETEPTRLNPN
RRYEDQMVPSITSSLIRPEEDEESSLNLRNSVGDSRAEVPRNMVNTNQAQQRRAEPASNQ
VTAMIPEFNIRIVAESTEDSTAESSSSGRRERSGGIVPEWSPGYSEQFPSEENGIGGGST
TSSYLQNHHEILNWRRLSQTG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttctgtatctggttgtggttctggtggttgtagtattgtatggtttagaaga
gatcttagggttgaagataatccagctttagcagcagcagtaagagctggtccagtgatt
gctctgtttgtttgggcaccagaagaagaaggacactatcatccaggtagggtttctagg
tggtggctcaagaacagtttggctcagcttgattcttctcttagaagtcttggtacttgt
cttatcaccaagagatctactgatagtgttgcttctcttcttgatgttgttaaatccact
ggtgcttctcagatcttcttcaaccatttgtatgatccattgtctttggtgcgtgatcac
cgagctaaagatgttttgacggcgcaaggcatagcggttcgatcattcaacgcagacttg
ctttatgagccatgggaagtgactgatgaattaggccgtcctttctctatgtttgctgcg
ttttgggagagatgtcttagtatgccttatgaccctgagtctcctcttcttccacctaag
aagatcatttcaggggatgtgtctaaatgtgttgcggatccattggtgtttgaggatgac
tctgagaaaggaagcaatgcacttctggctcgtgcttggtctcctggatggagtaatggt
gataaagctctcacaacgtttataaacggtccattgcttgaatactctaagaaccgcaga
aaagccgatagtgctacaacctcgtttctttctccacacttgcattttggggaagtgagt
gtgagaaaagtttttcatcttgttcggatcaaacaggtcgcgtgggcaaacgaaggaaac
gaggccggggaagaaagcgtgaatcttttcctgaaatctattggtctcagggagtattct
aggtacataagttttaaccatccatattcccatgaaagaccacttcttggccatctaaag
ttcttcccttgggctgtggatgagaactatttcaaggcatggaggcaaggccggactgga
tatccgttggtcgatgccgggatgagagagttatgggctactggttggttgcatgatcgc
ataagagtagttgtttcaagcttctttgttaaagtgcttcaattaccatggagatggggg
atgaagtatttctgggacacacttcttgatgcggatttagaaagcgatgctcttggttgg
caatacattaccggtactctcccggatagccgggagtttgatcgcatagataaccctcag
tttgaagggtacaagtttgatccaaatggtgaatacgtaaggcgatggcttcctgaactc
tctagactcccgacagactggatacatcatccgtggaacgcacctgagtccgttcttcaa
gctgctggtatcgagcttggatcaaactatcctctaccaattgtaggattagacgaagca
aaagcacggcttcatgaagcgctttcacagatgtggcaactagaagctgcttcaagagct
gcaatagagaacggatccgaagaaggacttggagattctgctgaggtagaggaagctcct
atagagttcccaagggacattacaatggaagagactgaaccaaccagactcaacccaaac
aggagatatgaggatcagatggttccaagcattacttcttctttgatcagacctgaagaa
gacgaagagtcgtctcttaatttgagaaattcagtaggagatagcagagcagaggttcca
aggaacatggttaacaccaaccaagctcagcagcggagagcagaaccggcttcaaaccaa
gtcactgctatgattccagaatttaatatcagaattgttgcagagagcactgaagactca
acagcggaatcttccagcagcggaaggagagaaagaagcggaggcatagtccccgagtgg
tctccagggtactcagagcagttccctagtgaagaaaatggtattggaggaggaagtaca
acgtctagctacttgcagaatcaccatgaaatactgaactggagacggctttcacaaacc
gggtaa
DBGET
integrated database retrieval system
