Arabidopsis thaliana (thale cress): AT4G10340
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Entry
AT4G10340 CDS
T00041
Symbol
LHCB5
Name
(RefSeq) light harvesting complex of photosystem II 5
KO
K08916
light-harvesting complex II chlorophyll a/b binding protein 5
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00196
Photosynthesis - antenna proteins
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
AT4G10340 (LHCB5)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ath00194
]
AT4G10340 (LHCB5)
Photosynthesis proteins [BR:
ath00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
AT4G10340 (LHCB5)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
826626
NCBI-ProteinID:
NP_192772
TAIR:
AT4G10340
UniProt:
Q9XF89
A0A178UW55
Structure
PDB
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All DBs
Position
4:6408007..6409849
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AA seq
280 aa
AA seq
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MASLGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELA
KWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARW
AMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVV
LLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFF
IQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttgggtgtgtcggaaatgcttggtactccccttaacttcagggcagtttca
agatcgtctgctccgttggcatcaagcccatccacgttcaagactgttgctctcttctct
aagaaaaagccagctcctgctaagtccaaggctgtctctgagactagcgatgagctcgcc
aagtggtatggtcctgacaggagaattttcttgcctgatggtcttttggatagatcagag
atcccagagtacttaaacggtgaagttgctggagattatggttatgacccatttggtctt
ggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccatgcgagatgg
gctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatatggcgctaac
tgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatggaaacacattg
aactactttggcaagaacatccctatcaaccttgttctcgccgtagttgctgaggttgtt
ctcctcggtggagccgagtactacagaatcaccaacggattggatttcgaggacaagcta
cacccaggaggtccatttgatcctctaggccttgctaaggaccctgagcaaggagctctt
ctcaaagtcaaagagatcaagaacgggagattagccatgtttgcgatgctcggtttcttt
atccaagcgtatgttaccggagaaggtcctgttgagaaccttgcaaagcatctcagtgat
ccttttggaaacaacttgcttaccgtcatcgctggaactgccgagagagctcccactctc
taa
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