Arabidopsis thaliana (thale cress): AT4G10790
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Entry
AT4G10790 CDS
T00041
Name
(RefSeq) UBX domain-containing protein
KO
K18726
FAS-associated factor 2
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT4G10790
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AT4G10790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
UBA_4
FAF1
UBA_8
TAP_C
Motif
Other DBs
NCBI-GeneID:
826675
NCBI-ProteinID:
NP_192817
TAIR:
AT4G10790
UniProt:
Q9M0N1
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All DBs
Position
4:complement(6640546..6643149)
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AA seq
480 aa
AA seq
DB search
MVDTVDKLGYFQAITGLEDADLCTEILQAHGWDLELAISSFTSSDQDASSSAVDGGGNNR
DHDHNNATVTPDYPPRGIVDDTELVMRDDGGGNRGPGVAWRIITLPISIVSGSLGLVSGA
IGLGIWAAGGVLSYSLGMLGFRSGRGGGSESARLVSVSSAVGEAMEFVALFDRDYGSNNA
FKIDFVVEGFMDALQRSRSSFKLLFVYLHSPDHPDTPVFCGGTLCNEAVVAFVNENFVSW
GGSIRSSEGFKMSNSLKASRFPFCAVVMPAANQRIALLQQVEGPKSPEEMLAILQRIVED
SSPTLVTARVEAEERRTNLRLREEQDAAYRAALEADQAREQQRQEEKERLEREAAEAERK
LKEEEEARERAAREAEERQAARVRMRQEKALALGEEPEKGPDVTQVLVRFPNGERKGRMF
KSETKIQTLYDYVDSLGLLDTEEYSLITNFPRTVYGRDKESMSLKDAGLHPQASLFIEIN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggttgatactgttgacaaattaggttacttccaagcgattacaggtctcgaagatgct
gatttgtgtactgagatccttcaagctcatggttgggacctagaactagcaatctcttca
ttcacatcttctgatcaagacgcttcgtcttccgccgtcgatggtggtggtaacaatcgc
gatcacgatcacaataacgccaccgtgactcctgattatccacctcgcgggatcgttgac
gatacagagcttgttatgcgtgatgatggaggaggaaatcgaggtccaggagttgcgtgg
aggattattactttaccgatttcgattgtttctggtagcttagggttagtttctggagcg
atcgggttaggtatttgggccgctggtggtgttttatcgtattctcttggtatgttaggg
tttagatcagggagaggtggtggttcggaatcggctcggcttgtttcggtttcttctgct
gttggtgaagcgatggagtttgttgctttgtttgatagagattatgggagtaataatgct
tttaagattgattttgttgtggaaggatttatggatgcgcttcagcgatctaggagttcg
tttaagctcttgtttgtttacttgcattctccggatcatcctgatacacctgtgttttgt
ggtggaacgctttgtaatgaagccgttgtagcgtttgttaatgagaattttgtttcttgg
ggaggtagtattcgatctagtgaagggtttaagatgagtaatagcttgaaggcatcgagg
ttcccgttttgcgctgtggttatgcctgctgctaaccagagaattgctcttcttcagcag
gtcgagggaccaaaatctccggaagagatgcttgccatactccagagaattgtagaagat
agctcacctactttggtaactgctagggttgaggcggaggaaagaagaaccaatctgcgt
ctgagagaggaacaagatgctgcttaccgtgctgctcttgaagccgatcaagcaagggag
caacagagacaggaggagaaagagcgtttagagagagaagctgctgaggcagagaggaaa
ctcaaagaagaagaagaggctcgggagagagcagcgcgtgaagctgaagagagacaagct
gctagagtgcgaatgagacaagagaaagctcttgctcttggagaagaacctgagaaaggc
cctgatgttacacaagtgttagttcggttcccgaatggagaaagaaaagggaggatgttt
aagagcgaaaccaagatccagacattgtatgactacgtggattcacttggactcttagat
acagaagagtacagcttaatcacaaacttcccaaggacagtgtatgggagagacaaagag
tcaatgtcactgaaagacgcaggtttgcatcctcaggcaagtctcttcatcgagatcaac
taa
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