Arabidopsis thaliana (thale cress): AT4G11270
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Entry
AT4G11270 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K24738
rabconnectin-3b
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
AT4G11270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G11270
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
AT4G11270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
DUF4820
Motif
Other DBs
NCBI-GeneID:
826729
NCBI-ProteinID:
NP_001329550
TAIR:
AT4G11270
UniProt:
Q9SUT4
LinkDB
All DBs
Position
4:6854233..6860902
Genome browser
AA seq
1446 aa
AA seq
DB search
MKCRSVACLWSRAPPSHRVTATASLTNPPTLYTGGSDGSIIWWSISSSSESNSVTRLPHH
EIKPIAMLCGHTSPIVDLAICDPTILSSNGVVASDNGNADPFVNCCALISACTDGVLCVW
SRSSGQCRKRRKLPPWVGSPSILSTLPSEPRYVCVGCSYIDVDGAETLADTDFQKSRCTV
VVVDTYTLTIVHTVFHGNLSIGCLNFMGVVQLDEQESLLMADSFGRLQLVSVSEKSEPSK
GSLVSRNWLSEGEIAVSVITRGDLVAFFSKSRCVFWLLNREEAIGEISFVDDSHSSNFLF
KEAMILYSSTSTIEGDKDDSISETFVLWDGSGSAVLFTMSYIDGEFTYKNFGEIVTAPDD
KRSVKSTFCFVQLRQNLLRVESSCCDVEQPSQWRPHITIWSLCLGNGKEKELQRKVLGES
SYFADWISSSCLDPKGSVSAETGTSQSGSQCSAKNDLQSFVSDNGQCVSSSMVISENMYV
PYAVVYGFFSGEIEIAKFDFLHGIDSPASSPRSDTDPLVYKQRLLGHTGSVLCLAAHRMF
GDANGCNSSHVLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILSPAPTKRPWSKCF
LSVGDDSCVALSSLETLRVERMFPGHPNYPTKVVWDGTRGYIACLFRSLSRKSDPIDVLY
IWDVKTGARERVLHGAASHSMFDHFCAGISEKSHSGTVLNGNTSVSSLLFPVDEERKPFY
LKNYERAASLSTSKPSSSQEKTREESSTASSFLQSIRYPSIKCTCPFPGISTLIFDLSSL
AVYCQTHEDSDMHKMLEEKSDKATAQQKTSKDKSPVQKTLDNHAEVVHMDKAIGEYLIRF
SLSFLHLWGIDFELDQMLVAHLKLKRPESFIVTSGLQGDKGSLTLAFPGLNATLELWKSS
SEFTALRSVIMVSLAQCMISLSHSTATYSSNLAAFYTRNLAEKYPDLKPPLLQLLVTFWQ
DNSEQVRMAARSLFHHTASLAIPLPLCSDHASEHAELVRSLSGISLNEPKVLSTGEEYPT
NSLDSEHIHQAQRLSQAEESEILSWLESFEMQDWISCVGGTSQDAMAAHIIVAAALSIWY
PSLVKPGLAMLVVHKLLNLVMAMSEKYSSTAAELLSEGMETTWKTWIGPDIPRIVSDIFF
QIECVSSSVGAYQVVPSSIKETLVEVLLPSLAMADVLGFLSIIESQIWSTASDSPVHVVS
LRTLIRIIRAAPRNLVLHLEKAVNFVLQTMDPSNTVMRKTCLQTSMATLREVVRVFPMVI
LNDSSTRLAIGDVITEINNACIHIYDMRSMTKIRVLDASGPPGLPNFLRGASESAVTTAI
SALSFSPDGEGLVAFSENGLMIRWWSLGSVWWEKLSQSLTPIQCTKLIFIHPWDGFSSSS
SRTSVISSISNDEQELPLQETAKNISHVERLKQLVQHLDLSYRLEWASERKVVLTRHNVE
LGTCLL
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccgatctgtggcctgcctatggtctcgtgctcctccgtctcatcgggtcacc
gccacagcctctctaaccaatccaccgactctctataccggtggatccgatgggtcaatc
atctggtggagcatctcttcttcttccgaatccaattctgtaactcgtctccctcatcat
gagattaaaccgattgctatgttgtgtggccatacttcaccaatagtggatcttgctatt
tgtgatcctacaatactttcaagtaatggagttgttgcatcagataatggtaatgcggat
ccatttgttaactgttgtgcattgatcagtgcttgtactgatggtgtcttgtgtgtatgg
agtagaagtagtggtcagtgtaggaaacgaagaaaattacctccttgggttggaagtcca
tcgattttgtctactttgccatcagagcctagatatgtatgtgttggttgttcttatatc
gatgttgatggggctgagactttagcagatactgattttcagaagtcgagatgcacggtg
gttgttgttgatacttacactcttactattgttcatacagttttccatgggaatttatct
attggttgtttgaattttatgggcgtggttcagttagatgagcaggaatcattgcttatg
gctgattcgtttggtaggttgcagttggtctcagtgtcagagaaatctgaaccgagcaaa
ggctctctagtgtctagaaactggttgagtgaaggggaaattgctgtatcagtaataact
cgaggggatcttgttgcgtttttctcgaagagtaggtgtgtcttttggttgttgaatcgc
gaggaggcaataggagagatatcttttgttgatgattcgcattcttcaaattttctgttc
aaagaagcaatgatactttactctagtacatcaactattgaaggtgataaagatgatagt
atttctgaaacttttgtgctgtgggatggtagtggttctgctgtgctgtttactatgtca
tatatagatggtgaatttacatataaaaacttcggtgagattgttactgcccctgatgat
aagcgttccgtgaaatcaacgttttgttttgttcagttgaggcagaatcttcttcgcgtt
gagtctagttgttgtgatgttgaacaaccttctcagtggaggccccatataacgatctgg
tcattgtgcctaggaaatggtaaagaaaaagaacttcagcgcaaagtgcttggagaaagc
tcctattttgctgattggatttcaagctcctgtttagatcccaagggctcggttagtgca
gaaactggtacttcgcagtcaggaagtcagtgcagtgccaaaaatgatctacaaagcttt
gttagtgacaatggacagtgtgtgtcatcgtccatggttatttctgagaatatgtatgtc
ccatatgctgttgtctatggtttctttagtggtgagatagagattgcaaagtttgatttt
cttcatggaattgattctcctgcttcaagcccgagatcagatactgatccactcgtctat
aaacagcgtctattgggacatacaggatctgttctatgcttagcagcgcatcgaatgttt
ggggatgcaaatggatgtaattcttctcatgttttgatctccggaagtatggactgtacc
atccgcatttgggatctcgaaagcggaaatgttatcatgatcatgcatcatcatgttgct
ccagtgcgccagatcattctatccccagctccaacaaaacgcccatggagcaagtgcttt
ctatctgttggggatgattcatgtgttgctctttcttctcttgagactttgcgggtcgaa
aggatgtttcctgggcacccaaactatcctacaaaagttgtatgggatggtacaagaggc
tacattgcatgtctttttcgctccctttcgagaaaatcagatccaattgatgtcttatac
atttgggatgtgaaaacaggtgctcgagaacgtgtactccatggggcagcttcacattca
atgtttgatcatttctgtgcaggcattagtgagaaatctcattctggtactgtcttaaat
ggaaatacatcagtttcctctttgcttttcccagtagacgaagagaggaaaccattttat
ttgaagaactacgagcgagcagcctctttgtcaacatctaagccaagttcttcgcaggaa
aagactagagaagagagttctactgcttcgtcttttctccaaagcatcagatacccttcc
atcaaatgcacttgcccattccctggaatatctactctgattttcgatctttcgtcttta
gcagtttattgtcaaacacatgaagactctgatatgcataagatgctagaagagaagagt
gataaggcaactgctcagcagaagacttcaaaagacaagtctcctgtccagaagactcta
gataaccatgcagaagttgttcacatggacaaggctattggagaatatctaattcgattt
agtttatcctttctgcatttgtggggtatagattttgaactcgatcaaatgctagtagca
catctaaagctaaaaagaccagagagttttattgtaacctccggtttgcagggagacaaa
ggatcattgacattagcattccctggtttgaatgcaacacttgagctctggaaatcatct
tcggagtttactgcgttgaggtcagtgattatggtgtcacttgctcagtgcatgataagt
ctgtcacattccactgccacatatagcagcaacttggcagcgttctacacgcgaaatctg
gcagagaaatatccagatctgaagccaccattacttcagcttttggtaactttctggcaa
gataatagcgaacaagtccgtatggcagctcggtcattattccaccacactgcttctttg
gcaatacctcttccattatgcagtgatcacgcatctgaacatgcagaactggtgagatcc
ctgtctggaatcagtctaaacgaacctaaagttcttagcacaggggaagaatatcccaca
aacagtctggactctgagcatatccatcaagctcaacggctttctcaggctgaggagtca
gaaatactctcatggcttgaatcttttgaaatgcaagactggatttcttgtgttggggga
acaagtcaggacgcaatggctgctcacatcattgttgcggctgccttatcaatctggtac
ccaagtctagtaaaacctggtctagccatgctagtcgtccacaaattgttgaacctggtt
atggccatgagtgagaaatacagctcgactgctgcggagcttctctcagaaggaatggag
actacatggaaaacatggattggacctgacattcctcggatagtttcagacatatttttc
caaatagagtgtgtcagttcctcagtcggagcatatcaagttgtaccatcgtctataaaa
gagactctggtcgaagttcttcttccaagtttagccatggcggatgtccttggatttctt
agcataatagagagccaaatatggtctacagcttctgattctcctgttcatgtagtatct
ctcagaactctcatcagaataatccgggctgctcctagaaatctggtactgcatcttgag
aaggcagttaactttgttcttcaaacgatggacccaagcaacaccgtcatgcgtaaaact
tgcctgcaaacctcaatggctacgctaagagaagttgtgcgcgtatttccaatggtaatc
ttaaacgactcgtcaacaaggttagcaatcggcgatgttatcacagagatcaacaatgca
tgtattcacatatacgacatgcgaagtatgacaaaaataagggttttggatgcgagtgga
cctccgggtctcccaaattttctcagaggagcttcagaatctgccgtgacaacagctata
tcagctctcagcttttcacctgatggagagggattggttgcgttttcagaaaacggtttg
atgatcagatggtggtcactaggatcggtttggtgggagaaactaagccaaagtctcaca
cctattcaatgcaccaaactaatatttatccatccatgggatggattttcatcaagctct
tcacgaacaagtgtgatctcaagtatctctaacgacgaacaagaacttcctcttcaggaa
accgcaaagaacataagtcacgtagagcggctaaagcaacttgttcaacatcttgatctc
tcttatcgcctcgaatgggccagtgaacgcaaagtagttttaacaagacacaatgtcgag
ttgggcacttgcctgttgtaa
DBGET
integrated database retrieval system
