KEGG   Arabidopsis thaliana (thale cress): AT4G12100
Entry
AT4G12100         CDS       T00041                                 
Name
(RefSeq) Cullin family protein
  KO
K10609  cullin 4
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03420  Nucleotide excision repair
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT4G12100
  09124 Replication and repair
   03420 Nucleotide excision repair
    AT4G12100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT4G12100
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT4G12100
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT4G12100
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     AT4G12100
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      AT4G12100
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      AT4G12100
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT4G12100
SSDB
Motif
Pfam: Cullin
Other DBs
NCBI-GeneID: 826818
NCBI-ProteinID: NP_192947
TAIR: AT4G12100
UniProt: Q9SZ75
LinkDB
Position
4:complement(7246338..7248127)
AA seq 434 aa
MKRSISPDPFSSTKSPKLVHHSPDDGGAEGNPYRLPFTLSDENLSCLPISQAREPPPIFN
LDPNSVKDTQDRNKLYLAKAWDLLKPAIKIILDDDEYKKPGDVLCFTTIFRAVKRACLGD
PRQSELVFNLVKHECEPHIAELIQSLEKNCSGSDDPSVFLPHVYNRWLDFKRKMSLVSDV
AMYQTLNGLTLWDVGQKLFHKQLSMAPQLQDQVITGILRLITDERLGKAANNTSDLLKNL
MDMFRMQWQCTYVYKDPFLDSTSKFYAEEAEQVLQRSDISHYLKYVERTFLAEEEKCDKH
YFFFSSSRSRLMKVLKSQLLEAHSSFLEEGFMLLMDESLIDDLRRMYRLFSMVDSEDYID
RILRAYILAKGEGARQEGSLQELHTSIDKIWHQCFGQDDLLDKTIRDCFEGFGLHVPGEF
SDQLQWIDDDDDED
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgaaacgctcgatcagccccgaccctttttcctcaacgaagtcgccgaaactcgttcac
cactcaccggatgatggaggagcagagggcaatccttatcgtcttccttttaccttaagc
gatgaaaacctctcatgccttcctatctcccaggcgagggagcctcctcctatctttaac
ttggatcccaattctgtcaaagatacacaagacagaaacaaactatacttagcaaaagct
tgggacttgctaaagccagcgatcaaaatcatcttagatgatgatgaatacaaaaagcct
ggcgacgttctctgtttcactacgatttttagagctgttaagcgtgcttgcttaggcgat
cctcgacaatcagaactggttttcaatcttgtcaagcatgagtgtgagcctcacattgct
gagcttatacagtctttagaaaagaattgcagtggcagtgatgatccctctgtgttcttg
ccacacgtgtacaatcgctggctagactttaaaaggaagatgagtcttgtgtctgacgta
gccatgtatcagactcttaatggcttgacattgtgggacgtgggccagaagcttttccat
aaacaactctccatggcccctcaacttcaagatcaagttattaccggcatattaagactc
atcactgatgaaagattaggcaaggctgcgaacaacacgagtgatctcctaaagaatctt
atggacatgttccgcatgcagtggcagtgtacatatgtgtataaggacccttttcttgat
tccacttctaagttttacgccgaggaagcagagcaagtcctgcagcgatccgacatttcc
cactacttgaaatatgtcgagaggactttccttgcggaagaggaaaaatgcgataagcat
tatttcttcttttcatcttcccggtctcgactaatgaaagtcttaaagagtcagctcctg
gaggcgcactcttcttttcttgaagagggttttatgctattaatggatgagagtctcatc
gatgaccttagaagaatgtatcgtttgttctctatggtagattcggaggattatatagac
cgcattctgagagcctacattttggcaaaaggagagggagctaggcaagaaggctccttg
caggagttgcatactagcatcgataagatatggcatcaatgctttggtcaggacgatttg
ttggataagaccatcagagactgttttgagggttttggtcttcatgtgccgggtgaattt
tcggatcaactgcagtggatagatgatgatgatgatgaggattaa

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