Arabidopsis thaliana (thale cress): AT4G12120
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Entry
AT4G12120 CDS
T00041
Symbol
SEC1B
Name
(RefSeq) Sec1/munc18-like (SM) proteins superfamily
KO
K15292
syntaxin-binding protein 1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G12120 (SEC1B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT4G12120 (SEC1B)
Membrane trafficking [BR:
ath04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
AT4G12120 (SEC1B)
SNARE
SNARE associated proteins
Syntaxin-binding proteins
AT4G12120 (SEC1B)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AT4G12120 (SEC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
ATG17_like
SseC
Motif
Other DBs
NCBI-GeneID:
826820
NCBI-ProteinID:
NP_567388
TAIR:
AT4G12120
UniProt:
Q9SZ77
LinkDB
All DBs
Position
4:complement(7256522..7261180)
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AA seq
662 aa
AA seq
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MSFSDSGSSSYGGEYKNFRQITRERLLCEMLRPERNGSSKLTWKVLVMDKFTVKIMSSAC
KMSEITQEGISLVEVITKHRQPMTAMEVIYFIQPTEENVTAFLSDMTGKSPLYKKAFVFF
SSPVSRSLVNLIKKDMRAMKRIGGLKEMNLEYISMDIQGFVTNNENALEELFCDDENHQR
ADACLNVVAKRIATVLASLKEYPFVRYRGAKALDATTMTTYRELIPTKLAASVWNCLARY
KQTIEDFPQTETCELLILDRSIDQIAPLIHEWTYDAMCHDLLNMEGNKYTHEVPSKTGDK
PEKKEVLLDEEDSIWVELRDAHIADASERLHEKMTNFVSKNKAAQLKHSSKDFGDLSSKD
LQKMVHALPQYSEQIDKLSLHVEIARTINRTIMEQGLRDLGQLEQDLVFGDAGRKDVIKF
LSTNHIISHESKLRLIMIVAAIYPKKFEGEKGRKMMELAKLSGDDVVAVNNMRLLGPVHT
ECKKSTTGSFPLKFDVLKTKRAARRDRVGETQTWQLSRFYPIVEELVEKLSKGHLPKQDY
PCMNEPKPTFYSGSLSPSASPVLPHSRRTPTWARRHLSDDGYFSDSVLGRASSGFKRKGQ
RIFVFIVGGATRSELRVCHKLTEKLDREVILGSSSFLDPLTFLTKMKQLNEEEEISLDDI
VI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccgattctggatcgtcctcttatggcggagagtacaagaatttcagacaa
atcaccagagaaagattactttgtgaaatgcttaggccagaaagaaatggaagctctaaa
ttaacttggaaggtacttgtaatggacaagttcactgtgaagataatgtcatctgcttgc
aaaatgtctgagatcacacaagaaggcatttctttggttgaggttataactaaacatagg
caacctatgacagcaatggaagtcatatactttattcaaccgaccgaagagaatgtcact
gcgtttttatcagatatgactggaaaatcaccactttacaagaaggcttttgttttcttt
agttctcctgtttcgagaagcttagttaatctcattaagaaggacatgagagcaatgaaa
cgaattgggggattgaaagagatgaacttggagtatattagcatggacatccagggcttt
gttacaaataatgaaaatgctttagaagagcttttctgtgacgacgaaaaccatcaaaga
gcagatgcttgcttaaatgtggtagctaaaagaattgctacagttttggcctcactaaag
gaatatccctttgttcgctaccgcggagccaaagctcttgatgccacaacaatgacaact
taccgagagttgattcctacaaagcttgctgctagtgtatggaattgtcttgcaagatac
aaacagacaatcgaagattttcctcagactgaaacatgcgaactacttatcttggatcga
tccatagaccagatcgcacctctcattcatgagtggacatatgatgcgatgtgccacgat
ttgcttaatatggaaggaaataaatacacacacgaggttccgagtaaaactggtgataaa
cctgagaagaaagaggttcttctagatgaggaagattccatttgggtggagcttcgtgat
gctcatattgcagatgcaagtgaaagattgcatgaaaagatgacaaacttcgtgtcgaag
aacaaagctgcgcaattgaaacacagttcaaaagactttggtgacctttcatcaaaagac
ttgcagaagatggttcacgctttgcctcagtacagtgagcaaattgacaagctttctcta
catgttgagatcgctagaacaataaacagaactatcatggaacaaggtctaagagatctc
gggcagctcgagcaggaccttgtttttggggatgctggaagaaaggacgttatcaaattt
ctgagcaccaaccatattataagccacgaaagcaagctgaggttaattatgattgttgct
gcaatatatccgaagaagttcgaaggtgaaaagggacgtaagatgatggagctagcaaaa
ttgtcgggcgatgatgtagtagctgtgaacaatatgagattacttggaccagtacatacg
gagtgcaaaaagagcacaacaggatcttttcctctcaagtttgatgtccttaagacgaag
cgagctgctcgaagagaccgagttggtgaaactcaaacatggcaactgtctcgtttttac
ccgattgttgaggaacttgttgagaaacttagcaaaggtcatttgccaaaacaagattac
ccttgtatgaatgaaccaaagccaaccttttattctggctctctgtctccatcagcgagt
ccggtattgcctcattcaagacgaacaccaacatgggcaagacgccatctttctgatgat
ggatatttcagtgactcggttctaggacgagcatctagtgggttcaagagaaagggacag
cggattttcgtgttcatagtaggaggagcaacgagatcagagttaagggtttgccacaaa
cttacggagaagctcgacagagaagtgatcttaggctcctccagcttccttgatccccta
actttcctcactaaaatgaaacaactaaacgaagaagaggagatctcacttgatgatatt
gtcatttga
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