Arabidopsis thaliana (thale cress): AT4G13210
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Entry
AT4G13210 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT4G13210
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AT4G13210
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
826936
NCBI-ProteinID:
NP_001190715
TAIR:
AT4G13210
UniProt:
Q9SVQ6
A0A178V021
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Position
4:7669948..7673376
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AA seq
438 aa
AA seq
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MVVARTLFSISATLIIFLALFLHVNAVQETREPKHESSRNTSTVDNLSDGEWHEHAVKDP
EEIAAMVDMSIRNSTYRRKLGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNA
VGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKT
IDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGI
SIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMM
QVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGN
RFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYARASSLAAKSSSLV
GMLTSSSGALKCRIGTLC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcgctagaacattgttctcaatctcagcaactctaatcatttttctagcactc
tttctccatgtaaatgcagttcaagaaacaagggaaccgaaacatgagagctcaagaaat
acatcaacggtagataatttatcagacggtgaatggcatgaacacgccgttaaagaccca
gaagaaatagcagcaatggtcgatatgagcatacgtaacagtacgtatcgtagaaagcta
gggttcttctcctcatgctcaacaggaaacccaatagatgattgttggcgatgcgataaa
aaatggcatcgccgaagaaagcgattagcggattgcgcgatcggtttcggacgtaacgca
gtcggaggccgtgatggacgttactacattgttactgatccatctgatcatgatccggtt
acaccaaaacccggtacactccggtacgctgttatacaagacgaaccgctatggatcgtc
tttaaacgtgacatggtcattactttaagccaagaactaatcatgaatagcttcaaaact
atcgatggtcgtggtgtcaacgtgcatatagctggtggtgcatgtctcacggttcagtac
gttacgaatattatcatccatgggataaatattcatgattgtaagcgaactggtaacgct
atggttaggagttcggagagtcattatggttggagaacgatggcggatggtgatggtatt
tcgatttttggatctagtcatatttggattgatcataattctctttcgagttgtgctgat
ggattgatagacgcaattatgggatctactgctattaccatctctaataattatctcact
caccacaacgaggctattttgttggggcataccgattcatacaccagagacaaaatgatg
caagtaaccattgcatacaaccattttggagaaggtcttatacagagaatgccaaggtgc
aggcatggatactttcacgtagtaaacaatgattacactcactgggaaatgtatgcaatt
ggtggaagtgctaaccctaccatcaatagtcaaggaaaccggttccttgccccgggaaac
cgtttcgccaaggaggtgacgaaacgggtaggtgcagggaaaggagaatggaacaattgg
aattggagatcccaaggagacttaatgctaaatggtgcctactttacttcatctggagct
ggagcttctgcaaattacgccagagcctctagtttggctgctaaatcatcttcccttgta
ggtatgcttacctctagctcgggtgctttgaaatgcaggatcggtacactttgttaa
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