Arabidopsis thaliana (thale cress): AT4G13710
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Entry
AT4G13710 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT4G13710
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AT4G13710
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
827005
NCBI-ProteinID:
NP_567409
TAIR:
AT4G13710
UniProt:
Q944R1
A0A178UXZ8
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All DBs
Position
4:7962428..7966521
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AA seq
470 aa
AA seq
DB search
MASSSQKLISVCVAVLVVLALTAMIFRNSEISLSRKLKTEVIQSSNSSTMAAIRKLKTEE
FQSLNSSTMAATRLDGEPQQQQHAVADDPDMVADEVAKLVQMSEQNRTARRKLGFFSCGT
GNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLR
HAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHG
LHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMG
STAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVV
NNDYTHWEMYAIGGSAEPTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDL
LLNGAFFRPSGAGASASYGRASSLAAKPSSMVDTITSTAGALGCRKGRPC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttctcagaaactgatcagtgtttgtgtcgctgtgctcgtcgtcttagct
ctcacggcgatgattttccggaacagtgaaatctctctctctaggaagctgaaaacagag
gtgattcagagctcaaatagctcaacaatggcggcgataaggaagctgaaaacagaggag
tttcagagcttaaacagctcaacaatggcggcgacaaggcttgatggtgaaccacaacaa
caacaacacgccgttgctgatgatccagatatggttgctgatgaagtcgctaagcttgtt
caaatgagtgaacagaacaggacagcaagaaggaagctaggattcttctcatgtggaact
ggtaatccaattgatgactgttggcgttgtgaccgtaactggcacaagaaccgtaaacgc
cttgcggattgtggcattggttttggaagaaacgcaattggtggtcgtgatggacgcttc
tacattgttactgacccgactgatgaagacgttgttaatcccaaacctggtactctacgc
catgctgtcatccaggaggagcctctgtggattgtgttcaaaagggatatggtgatagag
ctgaaacaggagctgatcatgaatagtttcaagaccattgatgcccgtggctccaacgtc
catatagccaatggtgcttgcatcaccatccagtttatcaccaatgtcatcattcatggt
cttcacattcatgattgcaagcctactggaaatgcaatggttagaagctcgccatctcac
tttggttggaggacaatggctgatggtgatgctgtctctatttttggatcatctcatatc
tggattgatcataactctctctctcactgtgctgatggccttgtcgatgctgtcatgggt
tctactgctattaccgtttccaataaccactttacccaccacaatgaggtgatgttgctt
gggcatagtgactcgtacacaaaggacaagctgatgcaagtaaccattgcttacaaccat
tttggagaaggactggttcagagaatgccaaggtgcagacatgggtacttccatgtggtt
aacaacgactacacacattgggagatgtacgccattggtgggagtgcagagccaaccatc
aacagtcaaggaaacagatatgctgctcccatggaccgcttcgccaaagaggtgacaaaa
agagtagagacagatgcaagcgagtggaagaagtggaattggagatcggaaggagacctt
ctactgaatggagcattcttcaggccatcaggagcaggagcatctgctagctatggacga
gcctcaagcttagcagctaaaccatcatctatggtcgacactattacctctactgcagga
gcactaggttgccgtaagggaagaccttgctag
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