Arabidopsis thaliana (thale cress): AT4G13780
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Entry
AT4G13780 CDS
T00041
Name
(RefSeq) methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00450
Selenocompound metabolism
ath00970
Aminoacyl-tRNA biosynthesis
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AT4G13780
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AT4G13780
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ath01007
]
AT4G13780
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT4G13780
Enzymes [BR:
ath01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
AT4G13780
Amino acid related enzymes [BR:
ath01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AT4G13780
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AT4G13780
Prokaryotic type
Other AARSs
AT4G13780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
827012
NCBI-ProteinID:
NP_193114
TAIR:
AT4G13780
UniProt:
Q9SVN5
LinkDB
All DBs
Position
4:complement(7992967..7998595)
Genome browser
AA seq
797 aa
AA seq
DB search
MEDDGKSSPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIY
ICGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFGISFDKFGRTSTPEQTEVCQ
AIFNKLWDNKWLSENTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLL
NPTELKDPKCKVCQNTPRIRDTDHLFIELPLLKDRLEAYIKKTSVTGSWSQNAIQTTNAW
LRDGLRQRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPEN
VELYQFMGKDNVPFHTVMFPSTQLGTEENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGN
DVKDTNIPVEVWRYYLLTNRPEVSDTSFSWTDLQAKLNGELLSNLGNFVNRVLSFIAKPD
NAGYGSVIPDAHDAESHSLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNYY
LQASQFWKLYKEDKPLCAVVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQLNLPPQFSLSD
ERGEVLLASRPWDILPPSHRIGTPQPLFKELENDEVARYREKFAGSQSDRRARDEAANLA
DQLNKTKLSDAKKQKASSKGGGKPKPQPAADREITMARLDIRVGKIVKAEKHPKADALYV
EEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSDGS
KVELVEPPKTANIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTKENLVACYKDVPFT
TSAGVCKVSSISNGTIR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggcaagagcagccccaagttaccgatccctggaaagagaaatatacta
atcaccagtgctttgccttacgtcaacaacgttcctcatctcggaaacatcatcggatgt
gttctgagcgctgatgtgtatgctagatactgtcgtctccgtggctataatgcgatttac
atatgtggaaccgatgaatatgggactgcaactgagaccaaagctttggaggagaattgc
acccccaaggaaatctgtgacaagtaccatgccattcataaagaagtttatgactggttt
ggtataagttttgacaagtttgggcgaacttcaactccagaacagactgaggtgtgccaa
gcaattttcaacaagttgtgggacaacaagtggctttcagagaacaccatgcagcagctt
tactgcgatacatgcaagaagttcttagctgaccggcttgttgagggttcttgtccgttc
gaaggatgtaattatgattctgctcgtggagatcagtgcgaaaaatgtggaaagctcctg
aatcctactgaacttaaagatccgaagtgcaaggtctgtcaaaacacaccccgaattcgc
gacacagaccacctgtttattgagcttccgttactgaaagataggttggaagcgtatatt
aaaaagacctctgttactggatcttggagtcaaaatgctattcaaacgacaaatgcatgg
cttagggatgggcttagacagagatgcattacgagggatcttaagtggggagtgcctgtc
ccacatgagaaatacaaggacaaagtcttctatgtttggtttgatgctcctattggatac
gtctcaataacgtcttgctacacatctgaatgggagaagtggtggaagaatcctgagaat
gtggagctttatcagtttatggggaaagacaatgtgccatttcacactgtgatgtttccc
tctacccagcttggaactgaggaaaattggacactcatgaagacaatcagtgtgactgaa
tatttaaactatgaagacggaaagttctccaagagtaaaggtgttggagtgtttggtaat
gatgtaaaagatacaaatatacctgtcgaagtgtggagatactacttgctgaccaacagg
cctgaggtgtctgacacatcgttttcatggactgatttgcaagcaaaactgaatggcgag
ttgctgagcaacctaggcaactttgttaatcgagttctgagttttatagcaaagcctgat
aatgcaggttacgggtctgtcattcctgatgctcatgatgctgaatctcattctttaaca
aaatcactggcggaaaaggttgaaaagtttgtggcagagtatgttgaagccatggaaaag
gttaagctcaagcagggactgaaaactgctatgctgatttcaagcgaagggaactattac
ttgcaggcaagccaattttggaaactttacaaggaagataaacctttgtgtgcagttgtt
ataagaactgctgctggtttagtacaccttcttgctcaattgttagaacctttcatgcca
tccttttcttgtgaggtatttaaacagctaaatttgcctccacaattttctctctccgac
gagaggggagaggtattactagcaagtagaccatgggatattctgcctcctagccacagg
ataggcacccctcaacctttgttcaaggagttggaaaacgacgaagtggcacggtacaga
gaaaagtttgctggaagtcagtctgatagacgtgctagggatgaagcagcaaatttggcg
gatcaacttaataaaacaaaactttcagatgccaagaaacaaaaggcatcatcaaaaggc
ggaggaaaacccaaacctcaaccagctgctgatcgtgaaataactatggcaagacttgat
atccgagttggtaaaattgtgaaggctgagaaacatcccaaggcagatgcattgtatgta
gaagaaattgatgttgggggtggtgaaattcgcactgttgtcagtggactggtcaaatat
atacctcttgaggaaatgcagaatcgtatggtttgtgttctttgcaacttgaaaccggcg
aaaatgagggatattgtgtcacaagcaatggttcttgcagcttccagtagtgatggaagc
aaggtggagttagttgagccccctaaaactgctaatattggagagcgagttacatttccc
gggtttgaaggcgagccagacgatgtcttaaacccaaagaagaaagtatgggagacgctt
ttggttgatctaaacacaaaagagaatctagttgcttgctacaaagatgtgcccttcact
acatctgcaggtgtatgcaaagtttcatccatcagcaatggcacgatccggtaa
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