Arabidopsis thaliana (thale cress): AT4G13930
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Entry
AT4G13930 CDS
T00041
Symbol
SHM4
Name
(RefSeq) serine hydroxymethyltransferase 4
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00260
Glycine, serine and threonine metabolism
ath00460
Cyanoamino acid metabolism
ath00630
Glyoxylate and dicarboxylate metabolism
ath00670
One carbon pool by folate
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
ath01200
Carbon metabolism
ath01230
Biosynthesis of amino acids
ath01240
Biosynthesis of cofactors
ath04981
Folate transport and metabolism
Module
ath_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AT4G13930 (SHM4)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AT4G13930 (SHM4)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AT4G13930 (SHM4)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AT4G13930 (SHM4)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AT4G13930 (SHM4)
Enzymes [BR:
ath01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AT4G13930 (SHM4)
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Gene cluster
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Motif
Pfam:
SHMT
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
827027
NCBI-ProteinID:
NP_193129
TAIR:
AT4G13930
UniProt:
O23254
A0A654FNZ9
Structure
PDB
PDBj
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Position
4:complement(8047692..8050157)
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AA seq
471 aa
AA seq
DB search
MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP
HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF
RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA
VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV
EKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTL
DIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMKYKD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagtctcttcatggggtaacacctctctcgtctccgtagatccagagatccac
gacctaatcgagaaggagaaacgtcggcaatgtcgaggaatcgaacttatcgcttccgag
aatttcacttccttcgccgtcatcgaagctctcggaagtgccttaaccaacaaatactcc
gaaggtattcctggtaatcgttattacggaggtaacgaattcatcgatgagatcgagaat
ctttgccgttcaagagctctcgaagctttccattgtgatccagcagcgtggggcgttaat
gttcagccgtattctggatctccggcaaatttcgctgcttacacggctttgcttcagcct
cacgatcgtatcatggggcttgatttgccttcaggtggtcatttgactcatggttactat
acatctggtggtaagaagatctctgcgacttcgatctactttgagagtcttccgtataag
gtgaatttcaccactggttacattgattacgataagcttgaagagaaggcgttggatttc
aggcctaagttgcttatctgtggtggtagtgcgtatcctagggattgggattacgctaga
tttagagctattgctgataaggttggagctcttttgctttgtgacatggctcacatcagt
ggtctcgttgctgctcaggaagctgcaaacccatttgagtactgtgacgttgtgacaacc
acaacccacaagagtttgaggggtccaagggctggtatgattttctacaggaagggtcca
aaaccaccaaagaagggtcaacccgagggtgcagtctatgattttgaggacaaaatcaac
tttgctgtattccctgcgcttcaaggtggtcctcacaatcaccagattggtgctctagct
gttgcgttgaagcaggctaatactcctgggttcaaggtctacgcaaaacaagtgaaagcc
aatgctgttgcccttggaaactacctaatgagcaagggttaccagattgtgaccaatgga
actgagaaccaccttgttctctgggatcttcgccctcttggattgaccggaaacaaggtt
gagaagctctgcgatctgtgcagcattacattgaacaagaacgcagtatttggagacagt
agtgctcttgctcctggaggtgtaagaatcggtgcacccgcgatgacatcgagaggattg
gtggagaaggactttgagcagataggagaattcctgagccgtgcagtgacactgacgttg
gacatccaaaagacatacggtaagttgttgaaggacttcaacaagggtttggtgaacaac
aaagatctcgatcagctcaaggctgatgtcgagaagttctcggcgtcttatgagatgcct
ggattcctcatgtctgagatgaagtacaaggattag
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