Arabidopsis thaliana (thale cress): AT4G14970
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Entry
AT4G14970 CDS
T00041
Name
(RefSeq) fanconi anemia group D2 protein
KO
K10891
fanconi anemia group D2 protein
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
AT4G14970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT4G14970
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
AT4G14970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
827156
NCBI-ProteinID:
NP_001319941
TAIR:
AT4G14970
UniProt:
F4JIJ1
LinkDB
All DBs
Position
4:8553643..8561664
Genome browser
AA seq
1484 aa
AA seq
DB search
MVFLSRKKPPPPPSSSSAAPSLKIPQPQKESVEPDAVEKMTAILAEVGCTLMNPYGPPCL
PSDLHAFRRNLTGRLSSFSANSGERDNVGALCSVFVAGFSLYIQSPSNLRRMLSSSSTTK
RDESLVRNLLLVSPIQLDIQEMLLEKLPEYFDVVTGCSLEEDVARLIINHFRWLDFIVNP
HVFTDKLMQVLSICPLHLKKEIIGSLPEIIGDHNCQAVVDSLEKMLQEDSAVVVAVLDSF
SNLNLDDQLQEQAITVAISCIRTIDGEHMPYLLRFLLLAATPVNVRRIISQIREQLKFTG
MSQPCASQNKLKGKVPAYNAEGSILHALRSSLRFKNILCQEIIKELNSLEKPRDFKVIDV
WLLILMYMNGDPVRKSIEKIFKKKVVDECIQEALLDQCIGGNKEFVKDNFASFVSLAEHL
LSSKEEKAREIGSHIYSRLFEEFTDNYSRQEILGALVTHVGSDNKFEVSSVLEMMTALVK
KYAQQLLPFSSHINGILDYLEGFTIDNLHKVYEVFSLLALSARASGDSFRSSISNELMMI
VRKQVSHPDLKYKKMGLVGSLRIVSSLGDAKSVPDFSSSQVSDCGEILELLKTSVESCRQ
SNLALIMFYDEFATILSHKLLQPEIMEWIGKHLGEFESLFLADLENEKMAEKGSYSGLEG
DLWMNLDGSISPICLNILALASSSSESCCLQILPSNFLLLSTVERLTNDGSLAGVDALLG
CPLHLPSSKYFAAAGWQSLAKKQKEILSLSLYYAANWIRELLNAFSSQIDEKIGCISQAT
VKDVTTKLLKRLRNLVFLESLLSNLITLSPQSLPELHPYSESHVEHPRKKNEKRKLDDDA
SQRKVSMKNNLKKSKHSDVNEKLRQPTIMDAFKKAGAVMSHSQTQLRGTPSLPSMDGSTA
AGSMDENCSDNESLIVKIPQVSSALEAQRFKFRPLLPQCLSILNFPKVLSQDMGSPEYRA
ELPLYLYLLHDLHTKLDCLVPPGKQHPFKRGSAPGYFGRFKLVELLNQIKRLFPSLRIHL
NIAISLLIRGDETSQTTWRDEFALSGNPNTSSIVVSESLVYTMVCKEVLYCFSKILTLPE
FETDKSLLLNLLEAFQPTEIPVANFPDFQPFPSPGTKEYLYIGVSYFFEDILNKGNYFCS
FTDDFPYPCSFSFDLAFECLLTLQLVVTSVQKYLGKVSEEANRKRNPGHFHGLVPNLHAK
LGTSAEKLLRHKWVDESTDNKGLKNKVCPFVSNLRIVQFTGEMVQTILRIYLEASGSTSD
LLDELACTILPQASLSKSTGEDDDARDHEFPTLCAATFRGWYKTLLEENLAILNKLVKTV
SSEKRQNCQPKTTEAHLKNIQKTVNVVVSLVNLCRSHEKVTIHGMAIKYGGKYVDSFLKV
FDFLEAHFQDHKELVIQLGMKQTAITSKIPATKRSLERFLFHVKALLHRTSGGSNFWMGS
LKHKDLRGQIVSSQAYIDNEADEVEETMSGEEEPMQEDELPLTP
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctctctcgcaaaaagcctccaccgcctccgtcgtcatcctcagctgctccg
tctctcaaaatcccccagccgcaaaaggaatccgttgagcccgacgcggtggagaagatg
actgccattctagccgaagttggatgcacactgatgaatccgtacggtccgccgtgtctt
ccttccgatctacacgctttccgccgcaatctcactggtcgcttatcgtctttctccgcc
aattccggcgagagagataacgtcggtgctctttgctcagttttcgtagctggattttca
ttgtatattcaatctccgagtaatcttcgaagaatgctttcttcttcttcaacaactaag
agagacgagagtttagttcgaaatctcctgcttgtatctccgattcaactcgatattcag
gaaatgctactcgagaagcttccggagtactttgatgtagttacaggatgttctttggag
gaagatgttgctcgccttatcatcaaccattttcgttggctcgatttcattgttaatccc
catgtgttcaccgataagttaatgcaagttctatctatttgtcctttgcacttaaagaag
gaaattattggatcgttgccagagattattggggatcacaactgtcaagctgtggttgat
tctttagaaaagatgcttcaggaagattctgctgttgttgttgcagtgcttgattctttc
tccaaccttaatttagatgatcaattgcaagaacaggcgattacagtagcgatatcatgt
attagaacaatcgacggagagcatatgccgtatctacttaggtttttgcttcttgctgca
actcctgtaaatgttagaaggataatctcccagataagggaacagttgaaattcaccgga
atgtcacaaccttgtgcttctcaaaataaactcaaaggaaaagtacctgcatataatgca
gaaggttctattctccatgctttaagatcaagccttcgatttaagaatatactctgtcaa
gaaattataaaggagctgaatagtctggagaaacctcgagatttcaaggtaatcgatgta
tggctgcttattctcatgtacatgaatggggatcctgtccggaagagcatcgagaagata
tttaagaagaaagtggttgatgaatgcatacaagaggccttgcttgatcaatgtataggt
ggtaataaagagtttgtgaaggataattttgcgtcatttgtttctttggctgaacacctc
ttgtcatccaaagaagaaaaggcaagggaaattggctctcatatctatagtcgtcttttt
gaagagtttactgacaattattcaagacaagagattctaggtgccctagtgacacatgtg
ggatctgataacaaatttgaggtcagttctgtcttggagatgatgacagctctggtgaaa
aaatatgcacagcaactcctccccttttcttcccacataaatggtattttggactactta
gagggatttactattgataatttgcataaggtctatgaggttttcagcctcctcgcacta
tcagctcgtgcaagtggtgattcttttcgatcttcaatctcaaatgaacttatgatgata
gtaaggaagcaggttagtcatccagacctcaagtacaaaaagatgggcttagttggaagt
cttaggattgtttcgtcacttggggatgcaaagagtgttcctgacttttcatcatcgcag
gtttcagattgtggggagattttggagctcttaaagacatctgttgaatcttgcagacag
tcgaacttagccctaattatgttctatgatgaattcgctaccattcttagccataaatta
cttcaaccagaaattatggagtggattgggaagcatctgggagaatttgagtcgcttttt
ctagccgatcttgaaaacgaaaagatggccgaaaagggttcatattctggactagaaggg
gatctttggatgaacttggatggtagtatatcaccaatctgtttgaatattttggccctg
gcatcttcatcctcagagtcctgttgtctgcagattcttccttcaaattttcttttgcta
tcaactgttgagaggttgacaaatgatggatcccttgccggggttgatgctctgctcgga
tgccctttgcaccttccttcttcaaagtactttgctgcagctggttggcagtctctggca
aagaagcagaaagaaatcctctccctctcgttatattatgctgcaaactggatacgagaa
ctcctgaacgccttcagttcccaaattgatgaaaaaattggttgcattagtcaggctact
gtaaaggatgtaacaacaaagcttctaaaacgcctcagaaatttagtattcttggaaagc
ttattgagtaatttgattacactatctcctcagtctctaccggagctccacccttattct
gaatctcatgtagaacatccgaggaagaagaacgagaagaggaagctggacgatgatgcc
tcccaacgcaaggtaagcatgaaaaataacttgaaaaaatcaaagcactcagatgtgaat
gaaaagctgcgacagccaactattatggacgcattcaagaaagcaggagcagtgatgagt
catagtcaaacacagttacgtggaaccccttcccttccatctatggatggcagcacagca
gcggggtcaatggacgaaaattgttctgataatgaatctctaattgtgaagattcctcaa
gtttcctcggcacttgaagctcaaagatttaagttcaggcctcttcttcctcaatgcctt
tccatcttaaattttccaaaggttctaagccaagacatgggcagccctgagtatagagct
gagctgcctttgtatttgtatctcttacatgatcttcacaccaagctggattgtcttgtt
cctcctggtaaacaacatccttttaaacgtggaagcgctccaggttatttcgggagattc
aaattggttgaacttctcaaccaaattaaaagactttttccaagcctcaggatacatttg
aatatagctatttccttgctaataagaggtgatgaaacttctcaaactacttggagagat
gagtttgctttgtccggaaatccgaacacatccagtattgtggtttctgaatctctggtt
tacacaatggtgtgcaaagaagtattatactgtttcagcaagatattgaccctccccgag
tttgaaacagacaagtcactgttgctgaatcttcttgaagccttccagccaactgaaata
ccagtagctaactttccggactttcaaccttttccgtcaccggggacaaaggagtacttg
tatattggcgtttcttatttctttgaagatattttgaataaaggtaactatttttgttcg
tttactgatgatttcccctatccatgttccttctcctttgatctggcctttgaatgtctt
ctcactctacagttagtggtgacctctgtacaaaaatatcttggtaaggtatctgaagaa
gctaacagaaagagaaacccaggtcattttcatggtcttgtacccaatctacatgccaaa
ctgggaacttctgctgagaaacttctcaggcataaatgggtcgatgaaagtactgataat
aagggcttaaagaacaaagtatgtccatttgtgtcaaatttgcggatagtacaatttaca
ggtgaaatggttcagaccatattgcgaatatacctggaagccagtggatccacatctgat
ttgcttgatgagcttgcttgtaccattttacctcaggcctctctatccaagtcaacagga
gaagatgatgatgcccgtgatcatgaattcccaaccctatgcgcagctacttttagagga
tggtacaagacattgcttgaagagaatcttgcaattctcaacaaactggtgaagacggtt
agctcagagaaacgacaaaactgtcaaccgaaaactactgaggcacacttgaaaaacatt
cagaaaactgtaaatgtggtagtatctttagtcaacttgtgccgatctcatgaaaaggtc
acaattcatggcatggctatcaagtatggtgggaagtatgtggactcatttcttaaagtt
tttgatttcttggaagcacattttcaagatcataaagaactagtcatccagttgggtatg
aaacaaacagccataaccagcaaaataccagcaacaaagagatctttagagcgttttctg
tttcacgttaaggctcttctccatagaacatcaggcggctccaacttctggatgggtagc
ttgaaacacaaggacttgagagggcaaatagtgagttctcaggcttatatagataacgaa
gccgatgaggttgaagaaaccatgtccggagaagaagagcccatgcaagaggatgaactt
ccattgacaccttaa
DBGET
integrated database retrieval system