Arabidopsis thaliana (thale cress): AT4G15560
Help
Entry
AT4G15560 CDS
T00041
Symbol
CLA1
Name
(RefSeq) Deoxyxylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00730
Thiamine metabolism
ath00900
Terpenoid backbone biosynthesis
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
Module
ath_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AT4G15560 (CLA1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AT4G15560 (CLA1)
Enzymes [BR:
ath01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
AT4G15560 (CLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
827230
NCBI-ProteinID:
NP_193291
TAIR:
AT4G15560
UniProt:
Q38854
A0A178V5I0
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:8883825..8887667
Genome browser
AA seq
717 aa
AA seq
DB search
MASSAFAFPSYIITKGGLSTDSCKSTSLSSSRSLVTDLPSPCLKPNNNSHSNRRAKVCAS
LAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSL
GVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESE
HDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM
IVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQ
LAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHV
VTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVV
AIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAY
DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNM
VATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQS
CLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFL
ALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREALF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctgcatttgcttttccttcttacataataaccaaaggaggactttcaact
gattcttgtaaatcaacttctttgtcttcttctagatctttggttacagatcttccatca
ccatgtctgaaacccaacaacaattcccattcaaacagaagagcaaaagtgtgtgcttca
cttgcagagaagggtgaatattattcaaacagaccaccaactccattacttgacactatt
aactacccaatccacatgaaaaatctttctgtcaaggaactgaaacaactttctgatgag
ctgagatcagacgtgatctttaatgtgtcgaaaaccggtggacatttggggtcaagtctt
ggtgttgtggagcttactgtggctcttcattacattttcaatactccacaagacaagatt
ctttgggatgttggtcatcagtcttatcctcataagattcttactgggagaagaggaaag
atgcctacaatgaggcaaaccaatggtctctctggtttcaccaaacgaggagagagtgaa
catgattgctttggtactggacacagctcaaccacaatatctgctggtttaggaatggcg
gtaggaagggatttgaaggggaagaacaacaatgtggttgctgtgattggtgatggtgcg
atgacggcaggacaggcttatgaagccatgaacaacgccggatatctagactctgatatg
attgtgattcttaatgacaacaagcaagtctcattacctacagctactttggatggacca
agtccacctgttggtgcattgagcagtgctcttagtcggttacagtctaacccggctctc
agagagttgagagaagtcgcaaagggtatgacaaagcaaataggcggaccaatgcatcag
ttggcggctaaggtagatgagtatgctcgaggaatgataagcgggactggatcgtcactg
tttgaagaactcggtctttactatattggtccagttgatgggcacaacatagatgatttg
gtagccattcttaaagaagttaagagtaccagaaccacaggacctgtacttattcatgtg
gtgacggagaaaggtcgtggttatccttacgcggagagagctgatgacaaataccatggt
gttgtgaaatttgatccagcaacgggtagacagttcaaaactactaataagactcaatct
tacacaacttactttgcggaggcattagtcgcagaagcagaggtagacaaagatgtggtt
gcgattcatgcagccatgggaggtggaaccgggttaaatctctttcaacgtcgcttccca
acaagatgtttcgatgtaggaatagcggaacaacacgcagttacttttgctgcgggttta
gcctgtgaaggccttaaacccttctgtgcaatctattcgtctttcatgcagcgtgcttat
gaccaggttgtccatgatgttgatttgcaaaaattaccggtgagatttgcaatggataga
gctggactcgttggagctgatggtccgacacattgtggagctttcgatgtgacatttatg
gcttgtcttcctaacatgatagtgatggctccatcagatgaagcagatctctttaacatg
gttgcaactgctgttgcgattgatgatcgtccttcttgtttccgttaccctagaggtaac
ggtattggagttgcattacctcccggaaacaaaggtgttccaattgagattgggaaaggt
agaattttaaaggaaggagagagagttgcgttgttgggttatggctcagcagttcagagc
tgtttaggagcggctgtaatgctcgaagaacgcggattaaacgtaactgtagcggatgca
cggttttgcaagccattggaccgtgctctcattcgcagcttagctaagtcgcacgaggtt
ctgatcacggttgaagaaggttccattggaggttttggctcgcacgttgttcagtttctt
gctctcgatggtcttcttgatggcaaactcaagtggagaccaatggtactgcctgatcga
tacattgatcacggtgcaccagctgatcaactagctgaagctggactcatgccatctcac
atcgcagcaaccgcacttaacttaatcggtgcaccaagggaagctctgttttga
DBGET
integrated database retrieval system
