Arabidopsis thaliana (thale cress): AT4G16340
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Entry
AT4G16340 CDS
T00041
Symbol
SPK1
Name
(RefSeq) guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G16340 (SPK1)
Membrane trafficking [BR:
ath04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
AT4G16340 (SPK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
827328
NCBI-ProteinID:
NP_001319958
TAIR:
AT4G16340
UniProt:
Q8SAB7
A0A654FPY5
LinkDB
All DBs
Position
4:complement(9228185..9241629)
Genome browser
AA seq
1830 aa
AA seq
DB search
MENNNLGLRFRKLPRQPLALPKLDPLLDENLEQWPHLNQLVQCYGTEWVKDVNKYGHYEN
IRPDSFQTQIFEGPDTDTETEIRLASARSATIEEDVASISGRPFSDPGSSKHFGQPPLPA
YEPAFDWENERAMIFGQRTPESPAASYSSGLKISVRVLSLAFQSGLVEPFFGSIALYNQE
RKEKLSEDFYFQIQPTEMQDAKLSSENRGVFYLDAPSASVCLLIQLEKTATEEGGVTSSV
YSRKEPVHLTEREKQKLQVWSRIMPYRESFAWAVVPLFDNNLTTNTGESASPSSPLAPSM
TASSSHDGVYEPIAKITSDGKQGYSGGSSVVVEISNLNKVKESYSEESIQDPKRKVHKPV
KGVLRLEIEKHRNGHGDFEDLSENGSIINDSLDPTDRLSDLTLMKCPSSSSGGPRNGCSK
WNSEDAKDVSRNLTSSCGTPDLNCYHAFDFCSTTRNEPFLHLFHCLYVYPVAVTLSRKRN
PFIRVELRKDDTDIRKQPLEAIYPREPGVSLQKWVHTQVAVGARAASYHDEIKVSLPATW
TPSHHLLFTFFHVDLQTKLEAPRPVVVGYASLPLSTYIHSRSDISLPVMRELVPHYLQES
TKERLDYLEDGKNIFKLRLRLCSSLYPTNERVRDFCLEYDRHTLQTRPPWGSELLQAINS
LKHVDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVDILTRVQQVSFDDADRNRFL
VTYVDYSFDDFGGNQPPVYPGLATVWGSLARSKAKGYRVGPVYDDVLSMAWFFLELIVKS
MALEQARLYDHNLPTGEDVPPMQLKESVFRCIMQLFDCLLTEVHERCKKGLSLAKRLNSS
LAFFCYDLLYIIEPCQVYELVSLYMDKFSGVCQSVLHECKLTFLQIISDHDLFVEMPGRD
PSDRNYLSSILIQELFLSLDHDELPLRAKGARILVILLCKHEFDARYQKAEDKLYIAQLY
FPFVGQILDEMPVFYNLNATEKREVLIGVLQIVRNLDDTSLVKAWQQSIARTRLYFKLME
ECLILFEHKKAADSILGGNNSRGPVSEGAGSPKYSERLSPAINNYLSEASRQEVRLEGTP
DNGYLWQRVNSQLASPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENV
SATVSLQVLEITENFSSMAASHNIATDYGKLDCITTILTSFFSRNQSLAFWKAFFPIFNR
IFDLHGATLMARENDRFLKQIAFHLLRLAVYRNDSVRKRAVIGLQILVKSSLYFMQTARL
RALLTITLSELMSDVQVTHMKSDNTLEESGEARRLQQSLSEMADEAKSVNLLRECGLPDD
TLLIIPEKFTENRWSWAEVKHLSDSLVLALDASLGHALLGSVMAMDRYAAAESFYKLGMA
FAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVARNDGVWSKDHVSALR
KICPMVSGEFTTEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILELVI
PVYKSRKAYGQLAKCHTLLTNIYESILDQESNPIPFIDATYYRVGFYGEKFGKLDRKEYV
YREPRDVRLGDIMEKLSHIYESRMDSNHILHIIPDSRQVKAEDLQAGVCYLQITAVDAVM
EDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSF
PALVNRLLVTKSESLEFSPVENAIGMIETRTTALRNELEEPRSSDGDHLPRLQSLQRILQ
GSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEE
DQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacaatcttggtcttcgatttcgtaagctacctcgtcagcctcttgctctc
cctaagctcgatcctttgcttgatgagaatctggaacaatggccacatttgaatcaattg
gttcaatgttatggcactgaatgggttaaagatgttaacaaatacggtcactatgaaaat
attcgacctgattctttccagactcagatttttgaaggacctgatactgatactgagact
gagattcgtcttgctagtgccaggagtgcaactattgaggaggatgttgccagtatttcc
gggaggccgttttctgatcctggatcctctaagcattttgggcaacctcctttacctgct
tatgaaccagcttttgactgggaaaatgaaagagctatgatttttggtcagagaactcct
gaatctcctgcagctagctattccagtggattgaagatctctgtcagagttttgtctcta
gcttttcagtctggcttagttgaaccattttttggctcgattgcattgtacaatcaagag
aggaaggagaaactctctgaggatttttatttccagattcagccgacggaaatgcaggat
gctaaactttcatctgaaaatcgtggagtattttatctagatgccccatcagcatcagtt
tgcctgcttattcaattagaaaaaacagcaactgaggaaggaggcgttacatcatctgtc
tattcccgtaaagagcctgtgcacttaactgagagggaaaagcaaaagttgcaggtctgg
tctcgcattatgccttaccgagagtcttttgcttgggcagttgttccgctttttgataat
aatctcaccacaaacactggtgaatctgcttcccctagcagtcctcttgctcctagtatg
actgcgtcaagttcccatgatggtgtttatgaaccaattgcaaagatcacatcagatgga
aagcaaggttattcaggtggaagttctgtcgtagttgaaatatctaatttaaataaagtt
aaagagagctactctgaagagtccattcaggaccccaaacggaaggttcacaaacctgtt
aaaggggttctaagactggaaattgagaaacatcggaatggacatggagactttgaagat
ctatctgagaatggaagtatcataaatgactcccttgatccaactgaccgcctcagtgac
ctgactcttatgaagtgtcccagttctagttctggtggaccccgtaatggctgttcaaag
tggaattcagaggatgcaaaggatgtttcgagaaatctaacaagttcatgtgggactcct
gacttaaattgttatcatgcttttgatttttgctctacgacaagaaacgagccttttcta
catctcttccattgcctttatgtgtatcctgtagctgttactttaagtcggaagaggaat
ccctttatccgtgtagaattgagaaaggatgacacagatatccgaaaacaaccactcgag
gcaatatatccaagagaacctggtgtttcactccagaaatgggttcatacacaggtcgct
gttggtgctagggccgctagctaccatgatgaaattaaggtctctcttcctgccacatgg
acgccatcacatcatctgttattcactttttttcatgttgatctccagacaaagcttgaa
gctccaagaccagtagttgttggatatgcatcacttccattatctacatatatccactca
cggtctgatatttctctaccagtaatgagagaacttgttccccactatcttcaggaaagc
accaaggagaggttggattatttggaagatggcaaaaatatttttaagttgcgactgaga
ctttgttcatctctttatcccaccaacgaacgtgtcagggatttctgtctagagtatgat
agacataccctccagacaaggcctccctggggttcagaactgttgcaggcaataaacagt
ttgaagcacgttgattctactgccttgcttcagtttctttacccaattcttaacatgctc
cttcatcttattggcaatggtggagaaacccttcaggttgcagcattcagagccatggtg
gatattttaactcgggtgcagcaggtgtcgtttgatgatgctgaccgaaatcgatttctg
gtcacctatgttgattattcttttgatgattttggaggcaatcaaccaccggtttatcct
ggattagcaactgtgtggggaagtttagctagaagcaaggccaaaggttaccgggttgga
cctgtatatgacgatgtattatcaatggcgtggtttttcctcgagttgattgttaaatca
atggcattggagcaagcacgtctttatgatcacaatctacctacaggcgaggatgttcca
cccatgcagctcaaagaaagtgttttccgatgtatcatgcaattgtttgattgtctttta
actgaagtacatgaacgttgtaaaaagggcttaagcttggcgaaacgtctgaacagcagt
ttggccttcttctgttatgatcttttatatatcattgagccctgccaggtctatgaactg
gtatcgttatacatggacaagttttctggtgtttgtcaatctgttctacacgaatgcaag
ctcacgtttttgcaaattatctccgaccatgatctttttgtagaaatgcctggtagagac
ccatcagacaggaactatttatcatccatattaatacaggagttatttctctcactggat
catgatgagctgcctctgcgggcgaagggagcaagaattttagtgatccttttatgcaag
catgaatttgatgcgcggtaccagaaagctgaagataagctgtatattgcacaactgtat
tttccttttgtcgggcagattttagatgaaatgcctgttttttataacctaaatgctact
gaaaagcgtgaggttttaattggtgtgctgcaaattgttcgtaatctggatgacacatca
cttgtcaaagcatggcagcagagcatcgctcgtactcgattatatttcaaactcatggaa
gaatgcctcatacttttcgagcacaagaaggctgctgacagcatcctcgggggcaacaat
tctcgtggtcctgttagtgaaggagctggatcaccaaagtactccgagcgactttctcct
gctatcaacaattatctgtcagaggcttctcgccaagaagtcaggctagagggaacacct
gataatgggtacctgtggcagagagttaattctcagttggcctcccctagccaaccttat
tctctaagagaagctttagctcaagcacaatcttcccggattggagcttcagcccaggca
ctaagagaatcgctgcacccaattttgaggcaaaaactggaactttgggaggagaatgta
agtgccactgttagcctccaggttttggagatcactgaaaatttttcatcaatggcagcc
tctcacaatattgcgaccgactatggcaaattggactgcattactacaatactgacgagt
ttcttctcccgaaaccagtcattagctttctggaaagccttctttccaattttcaacaga
atctttgatcttcatggggctacactgatggccagggaaaatgatcgcttcttaaaacag
atagccttccatcttctccggcttgctgtttaccgcaatgacagtgtcaggaaaagggct
gttattggtcttcaaatactagttaagagctcgctatactttatgcagactgctaggctg
agggctttgctgacgattacactgtcagaactcatgtcggatgtccaagtgactcatatg
aagtcagataatacattagaagagagtggagaagcacggcgacttcaacagtcattaagc
gaaatggctgatgaagctaagagtgtcaatttgttgagggagtgtggtcttcctgatgat
acactgttgattattcccgagaaatttacagagaaccgctggtcatgggctgaagtcaaa
catctttctgacagccttgttcttgctcttgatgccagcctcgggcatgcccttttggga
tctgtgatggctatggatcgatatgctgctgcagagagcttctacaaacttggaatggcg
tttgctcctgttccggatcttcacataatgtggttattgcatctatgtgatgcccaccag
gaaatgcagtcttgggcagaagctgcacagtgtgctgtggcggttgcaggtgtgataatg
caggccttggtggctaggaatgatggtgtgtggagcaaggatcatgtgtctgccttgcgt
aagatttgcccgatggtaagtggcgagtttacaacagaggcatctgcagctgaagtcgag
ggttatggtgcttcaaagctaacagttgactccgccgtcaagtatttacagcttgctaat
aagcttttctctcaagctgagctctaccatttttgtgcaagcattttagaacttgttatt
ccagtttacaagagcaggaaggcttatgggcagttggctaagtgtcacactttacttact
aatatatacgagtccattcttgaccaagaatcaaacccaatcccatttattgatgctaca
tattaccgggtgggattttatggggaaaagtttgggaagttggacaggaaagaatatgta
taccgagaaccacgagatgtgcggctaggggatataatggaaaaactgagccatatatat
gagtcaagaatggacagcaaccatattctgcacattataccagattcgaggcaagtgaag
gcagaagacttgcaggcaggagtgtgctatctgcaaattactgctgttgatgcagtgatg
gaagatgaggatcttgggagcagaagagagagaatattttctctttcaactggaagtgtt
cgagcacgagtgtttgatcgtttcttatttgacacaccatttacgaaaaatggtaaaacc
caaggtggattagaagatcaatggaagagaagaacagtgctgcagactgagggttcattc
cctgcccttgtgaataggctgttggttaccaagtctgaatcccttgaattctcgccagtg
gagaatgcgattggaatgattgaaacgcggacaaccgctctgagaaatgagctagaggag
cctcgtagctcggatggggatcacctaccacggcttcaaagtctgcagaggattctccaa
ggaagtgttgcagtgcaggtgaacagtggggtgttgagcgtgtgcacagctttcttatca
ggagagcctgcaacgagattgcgttcacaggaactgcagcaactaatcgcggcactgctt
gaattcatggcggtttgtaagcgagccattagggttcactttagattaatcggagaagaa
gatcaggaattccatactcagcttgtcaatggatttcagtctctcaccgcagaactctcc
cattacatccctgctatcttatccgaactttag
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integrated database retrieval system
