Arabidopsis thaliana (thale cress): AT4G16630
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Entry
AT4G16630 CDS
T00041
Name
(RefSeq) DEA(D/H)-box RNA helicase family protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT4G16630
03009 Ribosome biogenesis [BR:
ath03009
]
AT4G16630
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT4G16630
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
AT4G16630
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Pre-60S particles
Helicases
AT4G16630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
ARTD15_N
Motif
Other DBs
NCBI-GeneID:
827364
NCBI-ProteinID:
NP_193396
TAIR:
AT4G16630
UniProt:
Q9ZRZ8
A0A178V246
LinkDB
All DBs
Position
4:complement(9361952..9366748)
Genome browser
AA seq
789 aa
AA seq
DB search
MPSSFFFEDASDDELELIRNQEDSSEEDVKEGEAEEHEAGEDEDGEEEYEEEDDDEEEED
EKRKRDADAQSPWDFASYSSSVGEEHARRHTTSIDEKISKAIQHRPVPISINEEEEEEEE
EEDASDAETDKQEEYLSEDDEAAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLR
ACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATR
VLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMI
DHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKE
LVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSKVIIFSG
TKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIG
VQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVI
PEQSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHRDEIYARPKRTW
FMTEKEKKLVAQAEKDSAGNPAGGELVSADRAEDLKMKEKRKREREKNLPRKKRRKLEAA
REMLEDNEGEEEEEDEEGDEKRGRSRGKDKKKQETDKKGLTLKDLGYMRAKAVKAKQRAI
DSGKMERPKPDKKQSRSKPRNQPRGEEMKDLFKSDMGEKKQGRGGAAAAAKPRTKSKNSF
KSKARYKRR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgagtttcttctttgaggatgctagtgacgacgagctcgaattaatacgcaat
caagaggacagtagtgaggaagacgtaaaggaaggcgaagcagaagagcatgaagctgga
gaagacgaagatggagaagaggaatatgaagaagaagatgacgacgaagaagaagaagat
gagaagcggaaacgagatgctgatgctcaatctccttgggattttgcatcttactcaagc
tccgttggtgaagaacacgcccgccgtcacacaacgtctattgatgaaaagatctctaaa
gctattcagcatcgtccagttcccatttcaataaatgaagaagaagaagaggaagaagaa
gaagaagatgcctccgatgctgaaactgacaaacaagaggagtatctttcggaagacgat
gaggcagctgagtacaaaccagaagatgctactcccaagccgttcttctctacagtggat
ggagtttcatttcatgctgatactttcatggagcttaatctctctcgtccattgcttcga
gcttgtgaaactctcggatacaagaaacctactccgattcaggcagcttgtataccttta
gcacttacagggcgtgatctttgtgccagtgccatcactgggtcagggaagactgctgca
ttcgctttacctactcttgagaggttgctgttccgtcccaagcgggtctttgctactaga
gttcttattctcactccgactagggagttggccgtccagattcacagtatgattcagaat
cttgcacagtttactgatatcaagtgtggattgattgtaggagggctttctgtaagggag
caagaggtggttctgaggtctatgccagatattgttgtggcgactcctggacgtatgata
gatcatttgcgtaattctatgtctgttgatttggatgatctagcggttttaatccttgat
gaggcagaccgccttctacagactgggtttgccactgaaatcacagagctggttcgctta
tgtcccaagagaaggcaaacaatgctcttctcagccacaatgactgaagaagttaaagag
ctagtcaaactttccttgaacaaaccgttgcggctctcagctgatccatcagctagaagg
ccaccaggcttgactgaggaggtggtaagaatacgcaggactcgtgaggcaaatcaggaa
gctgttcttctatcattgtgcacaaggacttttaaatcaaaagtcattatctttagtgga
acaaaacaagctgcacatagactgaaaattttattcggattagctggcctcaaagcagct
gagcttcatggaaacctaactcaagcacaacgtcttgattctctggagcttttcagaaag
caggaggtcgattttctcattgctaccgatgtagccgctcgaggacttgacatcattggt
gttcaaacagttataaattatgcttgtcctcgggaaatagacagttatgttcacagagtt
ggtagaacagctagggctggaagggaaggttatgctgtaacgtttgtgactgatagtgac
cgatcccttttgaaagtcattgcaaagaaggtgggttcaaagttgaagagccgagtcatc
ccagagcagtcaatcgtcaagtggtctcagataatcgatgaaatggaagatcaatattcc
gctgttatttcagcagagagggatgagcgagctctaaggaaagctgaaatggaatttgca
aaggcggagaacatgcttgagcacagagatgaaatatatgcacgcccaaaaaggacttgg
ttcatgacagagaaggagaagaagctcgtggcacaggctgaaaaggattctgcagggaac
cctgctggaggcgaactagttagtgctgatagagcagaggacctcaagatgaaggagaag
agaaaacgtgaacgcgagaagaatcttcctaggaaaaaacgtagaaagctagaagctgcc
agagagatgctagaagataacgaaggagaagaagaggaagaagacgaagaaggagacgaa
aagagaggaagatcaagagggaaagacaagaaaaaacaggagacagataagaagggattg
acactaaaggatcttggttacatgagagcaaaagcggtgaaagcaaaacagagagcaatt
gattccggtaagatggagagaccaaagccggacaagaaacaaagccggagtaaaccaaga
aaccagcctcgtggtgaagagatgaaagatctgttcaagagtgatatgggcgagaagaaa
cagggcagaggcggtgccgcggctgcagcaaaacctcggacgaagtcgaagaactcattc
aagagcaaagccagatataagcgtaggtaa
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