Arabidopsis thaliana (thale cress): AT4G17100
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Entry
AT4G17100 CDS
T00041
Name
(RefSeq) poly(U)-specific endoribonuclease-B protein
KO
K03234
elongation factor 2
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ath03012
]
AT4G17100
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT4G17100
Translation factors [BR:
ath03012
]
Eukaryotic type
Elongation factors
AT4G17100
Exosome [BR:
ath04147
]
Exosomal proteins
Proteins found in most exosomes
AT4G17100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EF-G_D2
EFL1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
3770328
NCBI-ProteinID:
NP_193443
TAIR:
AT4G17100
UniProt:
O23463
F4JNE0
LinkDB
All DBs
Position
4:complement(9609910..9612655)
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AA seq
844 aa
AA seq
DB search
MSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRMTDTRADEAERGITIKSTGISLYYEM
TDASLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTET
VLRQSLGERIRPVLTVNKMDRCFLELKVDGEEAYQNFQRVIENANVIMATHEDPLLGDVQ
VYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVSESKMMERLWGENFFDSATRKWTTKT
GSPTCKRGFVQFCYEPIKIMINTCMNDQKDKLWPMLEKLGIQMKPDEKELMGKPLMKRVM
QAWLPASTALLEMMIFHLPSPYTAQRYRVENLYEGPLDDKYAAAIRNCDPDGPLMLYVSK
MIPASDKGRFFAFGRVFSGTVSTGMKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQET
VEDVPCGNTVAMVGLDQFITKNGTLTNEKEVDAHPLRAMKFSVSPVVRVAVKCKLASDLP
KLVEGLKRLAKSDPMVLCTMEESGEHIVAGAGELHIEICVKDLQDFMGGADIIVSDPVVS
LRETVFERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDEGRIGPSDDPKIRSKILAEE
FGWDKDLAKKIWAFGPDTTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGPLAEENMR
GVCYEVCDVVLHADAIHRGCGQMISTARRAIYASQLTAKPRLLEPVYMVEIQAPEGALGG
IYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSGQLRAATSGQAFPQCVFDHWD
MMSSDPLETGSQAATLVADIRKRKGLKLQMTPLSDYEDKLGNLJCVIMRNAATGGNLJCV
IATG
NT seq
1310 nt
NT seq
+upstream
nt +downstream
nt
atggacggattgatcagaggtttggtcgactcgacgtggctatcggaggaaaccaacgcc
gcggcggagacgatggtggtgatgatgaaggcaactcgagggacgagagatccagatcta
cttgggctaatgtggtttccggtgaggaagaggatcagaatcgcgcgggaggatcgtcgc
acggccgtcgccagaattcagaggagaatcaatgggagaagaagggcgaaaggcttccca
caaggcattcacaatcacatgaggaggaccaggaagagaatacatatgcggctaaagtga
gcgagaaacaagacttctcggagagccagcaagaggaaaatgatggttgggaaactgtgg
gcaaaaagaaacctgcaaggcaatcacataaggtccagaaggagcaatggcaagattaca
aacgcccagcaagtgaacaacactactcagacgaagttgaaacttatggaaacctagaac
cctcacaactagagctctcaggtctctcagaagcttgcaacaaactgtgggagctcgatt
taaaccgccttgttcctggaagggattatcaaatcgactgcggagatgggaaaagggtcc
atgagagagctgatatggctgaaggactactgttctcttgggtgagcgaggaagtctcta
gaaaaccgactttcgccagattctgttcattgcttgacaactacaaccccaacgaaggtt
acaaagaagtggtcacagaagaagagaggcaagagcaagcggctttcattgaagaaatta
gcagaacctctgtgatcaagtaccttcacaggtaccttgtgctcaaggacgtcgctcctg
gaagctacttagagttcaagagaatgttgacaagtctctggttcgatctgtatggccgcg
gaggtacatctggctcatcttctgcgtttgagcatgtctttgtaggtgagatcaaacaat
ctggtggggaacaagtctctggattccataactggcttcagttttacttggaggaagcca
aaggaactgtagattatcaaggctatatatttccccgacgtcgcggtgaaattcctgatt
cagagactcagctgctaacaatccaattcgagtggaacggtgttctaaaatcagtctcaa
gtactctagttggagtaagtccagagttcgagttggctctatacaccatgtgtttcttca
tgggcacagaagataaccacattcagttgggtccatacaatgtcaatgtcaaatgttacc
gacttggcaacaaccgtatcggctcagctttccccattgcagaatcttga
DBGET
integrated database retrieval system
