Arabidopsis thaliana (thale cress): AT4G17300
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Entry
AT4G17300 CDS
T00041
Symbol
NS1
Name
(RefSeq) Class II aminoacyl-tRNA and biotin synthetases superfamily protein
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AT4G17300 (NS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ath01007
]
AT4G17300 (NS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT4G17300 (NS1)
Enzymes [BR:
ath01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
AT4G17300 (NS1)
Amino acid related enzymes [BR:
ath01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AT4G17300 (NS1)
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AT4G17300 (NS1)
Prokaryotic type
AT4G17300 (NS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
827443
NCBI-ProteinID:
NP_193462
TAIR:
AT4G17300
UniProt:
O48593
LinkDB
All DBs
Position
4:9681348..9684984
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AA seq
567 aa
AA seq
DB search
MAATFLPATSLRLTQNSTLRFLSFFTISNPSYSLFRPLRRRVLPPFDAFPANSRRRCFCT
AVSESLGSGDGNKVESYEKRFGSKVGEFRKKLRIAEVKGGADEGLSRVGQSLNIMGWVRT
LRSQSSVTFIEINDGSCLSNLQCVMTSDAEGYDQVESGSILTGASVSVQGTIVASQGTKQ
KVELKVEKIIVVGECDSSYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHK
FFQESGFVWVASPIITASDCEGAGEQFCVTTLIPSSHENTDTSIDAIPKTKGGLIDWSQD
FFGKPAFLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLD
DDMACATAYLQYVVKYVLDNCKEDMEFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIEIL
LKANKKFDFPVKWGLDLQSEHERYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAA
MDMLVPRIGELIGGSQREERLEVLEARLDELKLNKESYWWYLDLRRYGSVPHAGFGLGFE
RLVQFVTGIDNIRDVIPFPRTPASAEF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgtttctgccggcgacatctctccgtctaactcaaaactctactctccgc
ttcttatcattcttcaccatttctaacccttcttattctctcttccgtcctctacgccgc
cgtgttctccctcccttcgatgcttttccggccaattctcgccggagatgcttttgcaca
gctgtttcggaatctctcggctccggtgatggaaataaagttgagagttacgagaaacga
tttgggagtaaagttggagaattcaggaaaaagttgaggatagctgaagtgaaaggagga
gcggacgaaggactgagtcgggtcgggcagagccttaacattatgggttgggttcgtaca
cttcgatctcagagcagtgtcacattcattgagataaatgatggttcatgcttatcgaat
ttgcaatgtgtgatgacttcggatgcagaagggtatgatcaggtagaatctggttcgatc
ttgactggagcatcagtatctgtacaaggtactattgtagctagccagggaacgaagcaa
aaagtggaacttaaggtggagaaaatcattgtggttggagagtgtgactcttcctatccg
atccagaagaaaagggtcagccgggaattcttgagaaccaaggctcatttacgtcctaga
accaacacttttggggcggtggcaagagttaggaatactctggcatatgctacacacaag
ttctttcaagaaagtggatttgtctgggtggcaagcccaattatcacagcttcggattgt
gaaggagcaggagaacagttctgtgtcactacacttattcctagctcccatgagaacacc
gatacttccattgatgcgattccgaaaacaaagggagggttgatcgattggtctcaggac
ttttttgggaaaccagcattcttaaccgtctctgggcaacttaatggagaaacttatgca
accgctctctcagatgtatacacatttggtcctacatttcgagctgagaattccaacacg
tcaaggcacttagccgaattctggatgattgaaccagaacttgcttttgccgacctggat
gatgacatggcctgtgccactgcctacctccagtacgtagtaaagtacgttcttgataat
tgcaaggaagacatggagtttttcgatacatggattgagaaaggaatcattcgccgcttg
agtgacgtagctgagaaagagtttctacagctggggtacacagacgccattgaaattctt
ctgaaagcaaacaaaaaattcgattttccggtgaagtgggggctggatctgcagagtgag
catgaaaggtacataacagaagaggcttttgggggtcgacctgtgataataagagactat
ccgaaggagatcaaagcattctatatgcgggagaacgatgatgggaagacagtggcagca
atggatatgcttgtgcctcggataggagagctgataggtggaagccaaagagaggaaagg
cttgaggtgttggaagcgaggcttgatgagttgaaactcaacaaagagagctactggtgg
tacctcgacctccgccgctatggttcagttcctcatgcaggatttggactagggtttgag
agactggtccaatttgtcaccggaattgataatatcagagacgttattcctttcccgcgc
acacctgcctctgctgaattctga
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