Arabidopsis thaliana (thale cress): AT4G17520
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Entry
AT4G17520 CDS
T00041
Name
(RefSeq) Hyaluronan / mRNA binding family
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT4G17520
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
AT4G17520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Merozoite_SPAM
Radical_SAM_N
GEMI5_RBS
Motif
Other DBs
NCBI-GeneID:
827467
NCBI-ProteinID:
NP_193485
TAIR:
AT4G17520
UniProt:
O23593
A0A654FQC9
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All DBs
Position
4:9771297..9773592
Genome browser
AA seq
360 aa
AA seq
DB search
MASVNPFDLLDDDAEDPSQIVASKPLKVVAPVQTAKSGKMPTKPPPPSQAVREARNAPGG
GRGAGRGGSYGRGGRGGNNRDSRNNDGPANENGYGGGYRRSEEGDGARRGGPVGGYRGDR
RGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQDDITPVTEESTAVV
DKNLTVEKQDGEGEATDAKNETPAEKAEEKPEDKEMTLEEYEKVLEEKKKALQATKVEER
KVDTKAFEAMQQLSSKKSNNDEVFIKLGTEKDKRITEREEKTRKSLSINEFLKPADGKSY
YRPRGGYQGGREGRGPREGNQRDGGRNLREGGRNQRDGGAAAQAPTPAIGDSAQFPTLGK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtgaaccctttcgatctcttggacgatgacgcagaggatcccagccagatt
gttgcgtctaagccattgaaggttgtggctccggttcagactgctaagtctggtaagatg
ccgactaagccgcctcctccttctcaagctgtgagggaggcaaggaacgctcctggtgga
ggtcgtggtgctggacgtggagggagttatggtcgtggtggacgtggtggaaacaatagg
gattcaaggaacaatgatggtcctgccaatgaaaacggatatggtggaggctacagacgc
tcagaagaaggagatggagctagacgtggtgggcctgttggtggataccgtggtgatcgc
cgtggaagctacagcaatggtggtgattcaggtgactctgaaagaccacgcaagaactat
gaccgtcacagtagaacagcgtacgggaatgaggataaacgtgatggagctggccgtgcg
aattggggaaccactcaggatgatattactccggtgactgaagaatccacagctgttgtg
gacaagaatttgactgttgagaagcaagatggtgaaggtgaagcaactgatgcaaagaat
gaaacacctgctgagaaagcagaggaaaagcctgaggacaaggagatgactttggaagag
tatgagaaggttttggaggagaagaagaaagctctgcaggcgaccaaggttgaggaaagg
aaggttgacactaaagcatttgaggccatgcaacagctctcaagcaaaaagagcaacaac
gatgaagtcttcatcaaactgggaacagagaaggacaagcgcattactgagagagaagag
aagacaaggaagtcattgagcatcaatgagtttctgaaacctgcggatggaaagagttac
tacagaccaagaggtggttaccaaggtggaagggaaggacgtggaccaagagaaggaaac
cagagggacggtggaagaaacctgagggaaggagggagaaaccagagggacggaggagct
gcagcacaggcaccaacaccggccattggggacagtgcacagttccctactttgggtaag
taa
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