Arabidopsis thaliana (thale cress): AT4G17610
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Entry
AT4G17610 CDS
T00041
Name
(RefSeq) tRNA/rRNA methyltransferase (SpoU) family protein
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT4G17610
03036 Chromosome and associated proteins [BR:
ath03036
]
AT4G17610
Enzymes [BR:
ath01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
AT4G17610
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
AT4G17610
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
AT4G17610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
DUF5917
Motif
Other DBs
NCBI-GeneID:
827480
NCBI-ProteinID:
NP_001319976
TAIR:
AT4G17610
UniProt:
F4JP86
LinkDB
All DBs
Position
4:complement(9804954..9815062)
Genome browser
AA seq
1828 aa
AA seq
DB search
MGSSVITSLSLSFKQVPPAAIPAFLDCVLSSTGVSPSTLFESLIEQFPFRLEDTVNGDKR
FDSDDCNHIASLVAGLCHLLKNFGFVAADNHNALQLFVWRVFIPLMKMVRAYDLDMLNKI
VESFFDVVIETNVLDMLGVSLVPFLLRSVGFSMGMRQHEESDFIKWGDLCLRDSLNTIDM
DENYIAQLSGSFPIPLSCHLLNLILNAAFQSHQAAPKVESFAAGMLWDLCNTTERLLSQS
VEHRSCAVSFLLPAIFKAFSSQSSLKISHQGNLFILSRNGFIKRIWECCKKLFSVGSIER
RDAYSVLSLCLSSGSWTDGTESFVSEKDAVQFDLRSEQEFWDEIKIGLVVDESLVRKQSL
HILKSVLSIIEVSETISEKKPEGNSVNRSMTRKETWAEKEAKSLGVGELYGSVDSGLTSQ
QGWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSLRYDGTLKSDCNNSHHGHMETPDE
EAKIFNWLEVLWNRGFRHDNPLVRCTVMESFFGIEWRRYKTCTQSMSQTFVLGPFIEGLN
DPTHHKDFGLKGIYTSRTIEGAAQYVSAYTSCLNPRNRVGFLINLASLAKKQSFCRAGFM
ALVQCIVSTAYVVGGYGDKEMGHLEDKFSGTAQESSCGHLSQDDMTHILDVLKFVAESSR
QHFNHKYRIRVYQKVLETAASVVNPCNVPLGTLLQFVSAIPREFTDHDGLLRKMMLEWLQ
GCNRKTSNSLCTDGTRLLASLYEYLKGFTSDNVESFDDEDLEAWDSQTKRWARVFFLMIN
KEEHLTDIIMFVQNNGLSFFQEKNHLKRAPAKFLIFILSMLLELQNMQDGISELSSSVKS
KSGIGSDEQTGKQIVVDASSIKKKFAVVLLSILKELIPFADSSCSIFWSHTTVENGALPG
SVIGKLGGPSQRRLSVPTTTAVLEAVLSVKTIGLISSYCAQFTSGVGELKLALAFFWKFT
QHTISSQICNSEAAAEIYLAAFEALASVLNAFVSLCSAGAFNLLENDSTLLSMVDGEFWL
QVSVPAFVRNINHLLTAGVLVRSRRAVLLSWKWLCVESLLSVMHILDARRIPEDRKSFFS
DDTVKSIFQDIVESLENAGEGSALPMLKSVRLALGILASGKSSLDGFSGVDTQTMWQLVK
SCWILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHITEDEHGPLKWFVEKVLEEGQKSP
RTIRLAALHLSGLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSLL
AKSPDPELTELFINTELYARVSVAGLFQKLANLAYMVEPASQNQDCQDALVAGKLFLLEL
LDAAVHDKDLAKELYKKYSAIHRRKIRAWQMICIMSRFVCNDIVGQVMDSVHICLHVSLQ
EQTERNNLPAVRQYLETFAINIYLKFPALVKEQLVPILKNYDSKAQQALSSYVFVAANVI
LHAEKIAQQTHLRELLPPILPLLTSHHHSLRGFAQLLVHRVLFRLFPPVESTSSHTISLE
KLSFENLKSYLDKNPDCSRLRASMEGFLDAYDPSTSATPAGVFVNRVEESEFECVPTCLM
DNVLSFLNDVREDLRASMAKDVVTIKNEGFKIDEEPKRRLIMSTTDEERLSEPSSLDFQR
KITLSKHEKQDASSTSVLRNGETYKRLFEMEKEDELVTQLLRSRSMEVERLKSGRQSLIL
VASLVDRIPNLAGLARTCEVFKASSLAVADASIIHDKQFQLISVTAEKWVPIMEVPVNSL
KLFLEKKKREGFSILGLEQTANSVSLDKYQFPKKTVLVLGREKEGIPVDIIHILDACIEI
PQLGVVRSLNVHVSGAIALWEYTRQQRI
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgtcagtgattacttcattgtcactgagcttcaagcaagttccaccagcagct
attcctgctttccttgactgtgttttaagctccacaggcgtatctccttcaactcttttc
gaatctctcattgagcaattcccttttcgtttagaggatacggtaaatggggacaagaga
tttgattctgatgattgcaaccacatagcttcattggtggctgggctttgtcatctacta
aagaattttggctttgttgctgcggataatcataatgcgttgcagctatttgtgtggaga
gtgtttattccattgatgaagatggttcgtgcatatgatttggatatgcttaataagatt
gtagaatcgttctttgatgtagtgatcgagactaatgtattggatatgttgggagtgagc
ttggtgccatttttactaagatcagttggtttttcgatgggaatgcgtcaacacgaagaa
tcagatttcatcaaatggggcgacctctgcctccgtgattctttgaatacaatagatatg
gatgaaaactacattgcacagttgtctggatcatttccaattccattgtcgtgccatctt
ctgaatttgattctgaatgctgcttttcaaagtcaccaagcagctccgaaggtggaaagt
tttgcagctggtatgctttgggatttgtgtaatacgactgagcggcttttgtcacaaagt
gtagaacatcgttcttgtgctgttagtttcctcctccctgctattttcaaggcattctct
tctcagtcatccttgaagatctcacaccaaggaaatctgttcatactttcaaggaatggc
ttcataaaaagaatttgggaatgctgcaagaagctgttctcggttggatcaatagagaga
agggatgcttacagtgttctgtctttgtgtctttcttctggctcttggactgacggaact
gaaagttttgtttcagaaaaagacgctgttcaatttgacttgaggtctgaacaagagttt
tgggatgaaatcaagataggcttggttgttgatgagagcttagtaaggaagcagtcattg
catatacttaaatcagttttatccattattgaagtgagtgagaccatttctgagaagaag
cccgaagggaattcagttaatcggtctatgacaagaaaggagacgtgggcagaaaaggaa
gccaagtcgcttggcgtcggagaattgtatggctctgtcgactctgggttgactagtcag
cagggatggcaagcttttctgctcttgtatgagatgcttgaggagtacggcactcatctt
gtagaagcagcatggagtaaccagattgatttattaatcaagtcatctctcagatatgat
ggaaccttgaaatccgactgtaataactctcatcatggtcacatggaaactccagatgaa
gaagctaaaatttttaattggttagaggttctttggaatcgaggctttcgtcatgataac
cctctagtcaggtgcacggtcatggagtcatttttcggtatcgagtggagaagatacaaa
acatgtacacaatcaatgtcccaaactttcgttcttggtcctttcatagagggtttgaat
gatcctacacaccacaaggattttgggctgaaaggaatctatacatcaagaacaattgaa
ggtgcagctcaatatgtgagtgcgtacacaagttgcctcaacccaaggaatcgggttgga
tttttgatcaacctggcatctcttgcgaagaaacagtctttttgtagagctggatttatg
gctctcgtacaatgtattgtttctacggcatatgtagttggaggatacggggacaaggaa
atggggcacctcgaagataaattctctgggactgcccaggaatcttcttgtggacattta
agtcaagatgatatgacacatatactggatgtcttgaagtttgttgcagagagcagcaga
cagcattttaatcataaataccgtattcgagtttatcaaaaagtgttagaaactgctgct
tctgtggtgaacccttgtaatgttcctcttggaacactattgcagtttgtttcagcaatt
cctcgggagtttactgaccatgatggtttattgcgcaaaatgatgttagaatggctccag
gggtgcaacagaaagacttccaacagtttatgtactgatggcactcgtcttctggcgagc
ctttatgagtatctgaaaggatttaccagtgataatgttgagagttttgatgatgaagac
ttggaggcatgggattcccaaacaaaacgatgggcaagagtatttttcctcatgattaat
aaagaagagcatctcaccgatatcataatgtttgtgcaaaataacggccttagttttttc
caagagaagaaccatttaaaacgagcacctgcgaagtttttaatctttattctgagtatg
cttttagagctccagaacatgcaagatggaatttctgagcttagttcttcggtgaaaagc
aagtcaggcattggctctgatgagcaaactggcaagcagattgttgtcgatgcttccagt
attaagaaaaagtttgctgtagttctcttatcaatactgaaggagctgattccatttgct
gattcatcttgttcaatattctggtctcatactactgtggagaatggtgctctgcctggt
tctgtcataggaaaactagggggtccaagtcaacgccggctatctgttcctactacaaca
gctgtactggaagctgtattgtcggtgaaaactattgggttgatctcgtcatactgtgct
caattcactagtggtgttggtgaactcaaattggcattggctttcttttggaagttcacc
cagcatactatatcatctcaaatttgtaattctgaggccgcagctgagatctatcttgca
gcatttgaggcgctagcttcagtactgaatgcatttgtgtccttgtgctcagctggagct
ttcaaccttttagaaaacgatagtacattgttatccatggtagatggtgaattttggtta
caagtttcggttccggctttcgtccgtaacattaaccatcttctcacagcaggagttctg
gtaagaagtagaagggcagttctgctaagctggaagtggctttgtgtggagtctctgtta
tcagtcatgcatattcttgatgccagacgtattccagaggatagaaagtcgttcttttca
gatgatacagttaaaagcatttttcaagatattgtagagagccttgaaaatgctggggag
ggttctgctttgcctatgctgaaatctgtcagactcgctttggggatacttgcgtctggg
aaatcatctttggatggtttctcgggtgtggatactcagacgatgtggcagttggtcaaa
tcatgttggatattgcatatcagctgtaagaaaagaagggttgcacccattgctgcgctt
ttgtcttctgtgttgcattcttctttgtttagtaataaagatatgcacataactgaagat
gagcatggtccgctgaagtggttcgttgaaaaagtacttgaggaaggtcagaaaagtcca
cgcacaattcgccttgcagcgttgcacctatcaggactctggctcatgtacccaaggacg
ataaagtactacattaaagaattgaggcttctgactctctatggttctgttgcatttgat
gaagattttgaagctgaattgtctgacaataatgatgccagaactgaagtatcattattg
gccaaaagcccagaccctgaactgacagaactttttatcaacacggagttgtatgcacgt
gtctctgtcgctggtctgtttcagaagctggctaatttggcctatatggttgaaccagca
agtcaaaatcaagattgtcaggatgctcttgtggctggaaaattgtttctattggagctt
cttgatgcagcggtgcatgataaagacttggcaaaggagctttacaagaagtacagtgct
atccatagacggaaaatacgtgcttggcagatgatatgcattatgtcgcgatttgtctgc
aatgacattgttggccaagtaatggacagtgtgcacatatgcttacatgtaagtttacaa
gaacagactgaaagaaacaacctgcctgctgttcgacaatacctggaaacatttgccatc
aacatttacctgaaatttccagcattggtgaaagagcagttagttcctatactaaaaaat
tatgacagtaaagctcagcaagctctctcctcctatgtctttgttgcagccaatgttatc
ctccacgcagaaaagatagctcaacagacacatctaagagaacttcttccaccaatacta
ccgttactaacttctcatcatcatagcttacgtggtttcgcgcagttattagtgcatcga
gtactctttagactgtttccccctgtagagtctacatcctctcatacaatatccctggag
aaactttcttttgagaatttgaagtcttacctggacaagaatcctgattgttcaagattg
cgagcatcaatggaaggatttcttgatgcatatgatcccagcacatctgctactccagcc
ggtgtttttgtcaatcgtgttgaggaaagtgagtttgaatgtgttccaacatgcctcatg
gataacgtgctctcttttctgaatgatgtaagggaagatctccgtgcctccatggcaaag
gatgtagttaccataaaaaatgaaggcttcaagattgatgaagagcccaagcgtcggttg
atcatgtccacgacagatgaagaaaggctttctgagccatcttcgttggatttccagagg
aagatcactctttccaaacatgagaagcaagatgctagttcaacttctgtgctccgaaac
ggggaaacttacaagcggctctttgaaatggaaaaagaagatgagctcgtgactcagctc
ttacgatctagaagcatggaggtcgaaaggttgaaatctggtcgacagagtttgatcctt
gtggcttcattggttgatcgtattcctaatcttgctggattagcccggacatgtgaggtg
tttaaagcatcaagtcttgctgttgcagatgcaagcataatacacgacaaacagttccaa
ctaattagtgtgactgctgagaaatgggttccaatcatggaagtccccgtaaacagtttg
aaactgttcttggagaagaagaaacgggaagggttctcaatcttgggactggaacagaca
gcgaatagcgtttcacttgacaaataccaattcccaaagaagacggttttggtgctgggt
cgtgaaaaggaaggcatcccagtggatataatccatatattggatgcttgtatcgagatc
ccacaacttggagttgttaggtccctcaatgttcatgtcagtggtgccattgccctttgg
gaatacactcggcagcaacgcatttga
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integrated database retrieval system
