Arabidopsis thaliana (thale cress): AT4G18130
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Entry
AT4G18130 CDS
T00041
Symbol
PHYE
Name
(RefSeq) phytochrome E
KO
K12123
phytochrome E
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
AT4G18130 (PHYE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
827538
NCBI-ProteinID:
NP_193547
TAIR:
AT4G18130
UniProt:
P42498
LinkDB
All DBs
Position
4:complement(10042137..10046346)
Genome browser
AA seq
1112 aa
AA seq
DB search
MGFESSSSAASNMKPQPQKSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPD
EHITAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEFDKV
KGLIGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVMD
LEPAKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMV
YQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVV
QSEELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSSKLWGLVVGHHCS
PRYVPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQ
SPGIMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAG
YPGAISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPRSSF
TAFLEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSRPVLSGNGVARDANELTSFVCEMV
RVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQEESRAALESLLC
KALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDYTENIIGVCFVGQDITSEK
AITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEVIGKMLP
GEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIEASLTANKSTNI
EGKVIRCFFFLQIINKESGLSCPELKESAQSLNELTYVRQEIKNPLNGIRFAHKLLESSE
ISASQRQFLETSDACEKQITTIIESTDLKSIEEGKLQLETEEFRLENILDTIISQVMIIL
RERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLLRNIVNHAPFPNSWVGISISPGQELS
RDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDGWVTPDGLGLKLSRKLLEQMNGRVSYV
REDERCFFQVDLQVKTMLGVESRGTEGSSSIK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagagttcaagctcagctgcaagcaacatgaaacctcaacctcaaaaatcc
aacactgctcaatactctgttgatgctgctctctttgctgatttcgctcaatccatttac
accggcaagtcttttaactactccaaatctgttatttcacctcccaatcacgttcctgat
gaacacatcacagcttacttgtctaacatccaaagaggcggtctagttcagccctttggt
tgtttgattgctgtcgaagaacctagttttaggatacttggtcttagtgacaactcttct
gactttcttggtttgttgtctcttccttccacctcccattctggtgagtttgataaagtc
aagggtttgattggaatcgatgcaaggacgctttttactccttcctctggagcttctttg
tctaaagctgcttcctttactgagatttccttgttgaatcctgttttggtccattctagg
acgacccagaagcctttttatgctattcttcacaggattgatgcagggattgtcatggat
ttggagcctgctaaatcaggtgatccggctttgacccttgcaggcgcagttcagtctcag
aagctagccgttagggccatttctaggctgcagtcacttcccggaggagatattggtgcc
ttgtgtgatactgttgtggaagatgttcagagacttaccggttatgaccgtgttatggtc
tatcagtttcatgaagatgatcatggtgaagttgtttctgagattagaaggtctgatttg
gagccttatttgggtttacattatccggcaacagatattcctcaggctgctcggttcttg
ttcaaacagaaccgtgtccgaatgatttgtgactgcaatgcaactccggttaaggttgtt
cagagtgaggaactcaagagaccactttgtttagttaattctactctaagagctcctcat
ggctgccatacgcagtatatggcgaatatgggctctgtagcttctcttgcactcgcaatt
gtagtaaaaggcaaagattcgagcaagctttggggattagttgttggtcatcattgttct
cctagatacgttccattcccgttgcggtatgcttgtgagtttctgatgcaagcatttggg
cttcagcttcaaatggaacttcagttagcatcacagttagccgagaagaaggctatgcgg
acgcagaccttgttgtgcgatatgcttctccgtgatactgtttccgctattgttacacaa
tctccgggtattatggaccttgtgaaatgtgatggagctgcgttatattacaaggggaaa
tgttggttggttggtgttactcctaatgagtcacaagttaaagacttggtgaattggctg
gtggagaatcacggtgatgattcgacgggtttaaccactgatagtttggtggatgcggga
taccctggtgccatctcacttggagatgccgtttgtggtgtggctgccgcaggattttct
tcaaaagattacttactttggttcaggtccaatactgcaagtgcaatcaaatggggagga
gctaaacatcatccaaaggataaagatgatgccggaagaatgcatccgaggtcatcgttt
acagcctttcttgaagttgcgaagagcaggagcttgccgtgggaaatctcagaaattgat
gctatccattccctgagacttataatgagagagtcatttaccagctctaggccagttttg
tctggtaatggcgtagcaagagatgctaatgagcttacttcttttgtgtgtgaaatggtt
agggtgattgaaaccgcaactgcacctatttttggggttgattcatccggatgtattaat
ggttggaacaagaaaaccgctgaaatgacgggattactagctagtgaagcaatggggaag
tcacttgccgatgagattgttcaagaggaatcacgcgcagctcttgaaagtctcttgtgc
aaagccctacaaggtgaagaggagaaaagtgtaatgctgaaactgagaaagtttggtcaa
aacaatcatccggattattcttctgatgtgtgtgttctcgttaactcctgcacgagtcgg
gattatactgaaaatatcatcggtgtctgcttcgttggtcaagacatcactagtgagaaa
gcaataacagatagattcatcagattgcaaggagattacaagactattgttcaaagctta
aatcctttgattccaccgatatttgcttcagatgaaaatgcttgttgttctgagtggaac
gcagcaatggaaaagcttacgggatggtcaaaacacgaggtgattgggaaaatgctaccc
ggtgaagtctttggagtcttttgtaaagtgaaatgccaagattcgctcacaaagttcttg
atctctctgtaccaaggaattgctggtgataatgttcccgagagttcactggttgagttc
tttaataaggaagggaagtacatagaagcatccttaaccgcgaacaagagtacaaacatc
gaaggaaaagttataagatgtttcttcttcttgcagattatcaataaggaatcggggttg
agctgcccagaactgaaagagagcgctcaaagcctcaacgaattaacttacgtaagacaa
gaaatcaagaatcctctcaacggtatccgatttgcacataagcttcttgaatcctcagag
atttcagctagccaaaggcagtttctggagactagtgatgcttgtgagaagcaaatcacg
acaataatcgaaagcacggacttgaaaagcattgaggaaggcaagttgcaattggaaaca
gaagagtttcgacttgaaaacatcttggacacaatcattagccaagtgatgattatattg
agagagaggaactcacaactaagggttgaagtcgccgaggagatcaaaactctgcctctc
aatggtgacagagtcaagctccagcttattcttgctgatcttctacgcaacattgtgaat
catgcgccgtttccaaatagttgggtaggtatcagtatctcaccagggcaggagctttca
cgtgacaatggtcgctatatccatctacagttcaggatgatacatccggggaaaggactt
ccttcagagatgctaagtgatatgtttgagactcgagatggatgggtcacccctgatggt
ttagggcttaagctttcgcggaaactattggagcagatgaatggccgtgtgagttatgtc
cgagaagacgaacggtgtttctttcaggtggatcttcaagtgaagacaatgttaggtgtt
gagtcaagaggaacagagggtagttcaagcataaagtag
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integrated database retrieval system