Arabidopsis thaliana (thale cress): AT4G18900
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Entry
AT4G18900 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K14791
periodic tryptophan protein 1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT4G18900
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
Other 90S particles
AT4G18900
Pre-60S particles
Other pre-60S particles
AT4G18900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_Aladin
WD40_WDHD1_1st
WD40_RFWD3
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
827624
NCBI-ProteinID:
NP_567565
TAIR:
AT4G18900
UniProt:
F4JSB9
LinkDB
All DBs
Position
4:10356465..10359169
Genome browser
AA seq
461 aa
AA seq
DB search
MRADELPSKEEIEMHKDSCKYFSNDTEEEETEDEEENGEVAHAKAVAEEFGKSSKSKNVS
SSMELDDEVAEGLKELDMDNYDEEDDGIEIFSSGRGDLYYKSNEMDPYLKRNDDHDDDSD
DDPPILPTDLVIVCAMTDDKEANRLDVYVSEDTSHGSPNMYNHHYRIIPAIPLCTAWLDC
PLKGGERGNFLAVGSDGTPTIEIWDLDAWFDMLPCVQLGGQNKEGNYKQGSHTRSVLGLA
WNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQT
VVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESN
PSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFI
AFSPDNPFLLAMGGVMGELKLWDTLSDTNVSSRYGSREVRP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctgatgaacttccttctaaggaggaaatcgaaatgcacaaagacagttgtaaa
tatttcagtaatgatacagaagaagaagagaccgaggatgaagaagagaatggtgaagtt
gctcatgcgaaagccgtagcagaagagtttggaaaatcatccaaaagcaagaatgtttct
tcttcaatggagcttgatgatgaggtagctgagggtttgaaagaactcgacatggataat
tacgatgaagaggatgatggaattgaaatttttagctccgggcgtggggatctttactat
aagagtaacgagatggatccatatctcaagagaaatgatgatcatgatgatgactcggat
gatgatccaccaatcttaccaaccgatttagtgattgtctgcgctatgactgacgacaaa
gaagctaaccgtcttgacgtttatgtatccgaggacacatcccatggttctccaaatatg
tataatcatcattacagaattataccagcaattccattgtgtactgcttggcttgattgt
ccacttaaaggaggagaaagagggaatttcctagctgttggttcggatgggacgccaaca
atagagatatgggatcttgatgcttggttcgacatgctaccttgtgtacaactaggagga
caaaacaaggaagggaactataaacaaggtagccacactagatcagttcttggtcttgct
tggaataaggagtttcggaatatacttgctagtgctagtgccgacaaaaaagttaaggta
tgggatgtggctactggaacgtgtaagattactatggagcatcacacaaaggaggttcaa
gcggttgcttggaaccattatgctccagaagtgcttctcagtgggtcctttgatcaaact
gttgtattgaaagacggaagacaaccttcacactcgggtttcaaatggtctgtcatgtcc
gatgttgaaagcttagcctgggatcctcatagtgaacactcctttgtggtaagtctcgaa
gatggaactgtcaagggctttgatgtacgtcaagcctccatttcagcctctgaatcaaat
ccaagcttcactattaatggacatgacgaagcagctacttccgtctcatacaacatttcg
gcacctaatcttttggcaacgggatctaaggatagaacggtaaagctttgggatctttca
aacaatgagccttcatgcattgctacacacaatccaaatgctggaggcttattcttcatt
gctttctctccggacaatcctttcttactcgctatgggtggcgtaatgggggagttaaaa
ctttgggatacactttcggacactaatgtctccagcagatacggaagcagagaagtccga
ccgtga
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