Arabidopsis thaliana (thale cress): AT4G18905
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Entry
AT4G18905 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K14791
periodic tryptophan protein 1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT4G18905
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
Other 90S particles
AT4G18905
Pre-60S particles
Other pre-60S particles
AT4G18905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
WD40_Gbeta
Beta-prop_EIPR1
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
827625
NCBI-ProteinID:
NP_001190765
TAIR:
AT4G18905
UniProt:
F4JSC0
LinkDB
All DBs
Position
4:10359877..10363300
Genome browser
AA seq
504 aa
AA seq
DB search
MITAVSWIPKGNLKAVPDVAEPPSKEELKELIESGAFARNVEGSNEDEEEEIEEDGEEIS
EVDHAKAVAEALGKSSKSKAVSSSMEVDEVSQGLKELDMDNYDEEDDEIELFSSGMGDLY
YPSNEMDPYLKDVDDEDDEEDIDDTTVKPTDSVIICARNEDDVSHLEVYLYEESSGSPNM
YVHHHIIIPEFPLCTAWLDCPLKGGEKGNFVAIGSKDTPTIEIWDLDVRDEVLPCIQLGG
IEEMIVSKKKKSKKQKPVCASNSSISSSSMASSHTESVLGLAWNKEFRNILASASADKKV
KVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDGRQPSHSGFKWSV
MSDVESLAWDPHCEHSFVVSLEDGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSSI
SYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGS
KGELHVWDTLLDANVARKYGSNRS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgataactgcagtgtcatggataccaaaagggaatctaaaagctgttcctgatgttgct
gagcctccgtcaaaggaagaacttaaagagctcattgagagtggtgcttttgcaagaaac
gtggaaggtagtaacgaggatgaagaagaagagattgaagaagatggagaagagataagt
gaagttgatcatgccaaggctgtagctgaagctttgggtaaatcttctaaaagcaaggct
gtttcttcttcaatggaggttgatgaggtttctcaaggattgaaagaacttgacatggat
aattatgatgaagaggatgatgaaattgaacttttcagttctggaatgggggatctttat
tatccaagtaatgagatggatccatatctgaaagatgttgatgatgaagatgatgaagag
gatattgatgacacgacagtcaagccgaccgattcggtgattatttgtgctaggaatgaa
gatgatgttagccatctagaggtttatttatacgaggaatcgtctggctctccaaacatg
tatgttcatcatcacataattataccagaattcccattgtgtactgcatggcttgattgt
cctcttaaaggaggggaaaaagggaattttgtagctattggttcaaaggatacaccgaca
atcgagatatgggatcttgacgttagggacgaggtgctaccttgtatacaactaggagga
atagaggagatgatagtgagtaagaaaaagaagagcaagaaacagaaaccggtgtgtgca
tcaaactcgtctatctctagttcgtctatggcaagttcccatactgagtcagtacttggt
cttgcttggaacaaggagtttcggaacatacttgctagtgctagtgccgacaaaaaagtt
aaggtctgggatgtggctactgggacgtgtaagattactatggagcatcacacaaaggag
gttcaagcggttgcttggaaccattatgctccagaagtgcttctcagtgggtcgtttgat
caaactgttgtcatgaaagacggaagacaaccttcacactcgggtttcaaatggtctgtc
atgtctgatgtcgaaagcttagcctgggatcctcattgcgaacactcctttgtggtaagt
cttgaagatggaaccgtgaagggttttgatatacgtgctgcacagtcaggttcagattct
gatttaaacccaacttacactatccaagcacatgcccaagacagaggagtctcctccatc
tcatacaacatttctacacccaatcttttggctacggggtctatggataaatcggtaaag
ctttgggatctttcaaacaatgaaccttcatgcattgctacacaccaaccaaatgctgga
gctgtgttttccatttcctttgcggtggacaaccctttcttgcttgctattggtggctca
aagggagagctacatgtttgggatacactgttggatgctaatgtcgctcgcaaatatggg
agcaatagatcttga
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