Arabidopsis thaliana (thale cress): AT4G19130
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Entry
AT4G19130 CDS
T00041
Name
(RefSeq) Replication factor-A protein 1-like protein
KO
K07466
replication factor A1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03030
DNA replication
ath03420
Nucleotide excision repair
ath03430
Mismatch repair
ath03440
Homologous recombination
ath03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AT4G19130
03420 Nucleotide excision repair
AT4G19130
03430 Mismatch repair
AT4G19130
03440 Homologous recombination
AT4G19130
03460 Fanconi anemia pathway
AT4G19130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT4G19130
03032 DNA replication proteins [BR:
ath03032
]
AT4G19130
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT4G19130
Transcription factors [BR:
ath03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
AT4G19130
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
AT4G19130
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
AT4G19130
MMR (mismatch excision repair)
AT4G19130
DSBR (double strand breaks repair)
HR (homologous recombination)
AT4G19130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
CDC24_OB3
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
827651
NCBI-ProteinID:
NP_567576
TAIR:
AT4G19130
UniProt:
F4JSG3
LinkDB
All DBs
Position
4:complement(10466407..10469329)
Genome browser
AA seq
784 aa
AA seq
DB search
MEVSLTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQG
MLGTDLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGK
HNDQRGADSGIKFNTTEQQGSGIRQVNNIEPGRSNAAISPQVGGTGSSVPASTTPSTRAY
SNPSSGNGVTRQDYARDPPTSYPHQPQPPPPMYANRGPVARNEAPPKIIPVNALSPYSGR
WTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQFYDQIVVGNLY
LISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIESMENN
CIVDVIGIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQSL
CDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWFEREGKSVPCISL
SREFSGSGKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFDNFCYTACPIMNGDRP
CSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAK
DLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATVVKVDKLNYSADT
RTMLGAMDKLRTRDANSLPINPEGSDYNADVVNTGIGSSGTRDPSSVQRRDFGLHAHQSG
QSGNHYSGGGATTSCNVCGNSGHVSAKCPGATKPQEQGQYMGGSYRGTTGSYGGGLPRQH
VGSY
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaagtttgacggcgggagcaatcgggaagataatgaatggagaagtgacgact
gaagcagatatgattccggtgttgcaagtgacggatttgaagcagattatggctcaacaa
gatccaacaagagagaggtttaggatggtgttatctgatgggacatacttgcatcaagga
atgctaggaactgatctcaacaatcttgtcaaagaagggactcttcaacccggttctatt
gttagacttactcgtttcgtcggtgatgtcatcaagggtcgaaggattgttattgttccg
caactggaggtgttaaaacagatttctgatattatcgggcatcctgttccaggaggaaag
cataatgatcaacgtggagcagattctggtattaagtttaatacaactgagcaacaaggt
agtggtatccgtcaagtaaacaatatcgagccagggagaagtaatgcagctatttcacct
caggttggtggtactggttctagtgttcctgcatcaacaacaccttccactcgggcatac
agcaatccgtcttcaggtaatggagtcactaggcaggactatgctcgtgatcctccaaca
agttatcctcatcagcctcaaccaccaccaccgatgtatgcaaacaggggaccagtggct
aggaatgaagcacctcctaagataattccagttaatgctcttagtccatattcaggtagg
tggaccatcaaggccagagtcacgaataaagcagcacttaagcaatacagtaatccccgt
ggggaagggaaagtgttcaactttgatcttcttgatgctgatggcggagaaatacgtgtt
acttgttttaacgctgtggctgatcaattctatgaccagattgttgttggtaatctttat
cttatctcgaggggaagtttgcggcctgcacaaaagaactttaatcatcttcgaaatgat
tacgagatcatgctggataatgcatcaactataaaacaatgctatgaagaggatgctgca
attccgcgccatcagttccatttccgtaccattggggatattgagagcatggagaataac
tgcatcgttgatgtaattggtattgtgtcatctatcagtcctactgtaacaataacgagg
aaaaacggaactgcaacaccgaaaagatcacttcagttgaaggatatgtcaggccgaagt
gttgaggtaactatgtggggtgacttctgcaatgcagaaggacaaaggctgcaaagtctt
tgtgattctggtgtgtttccggttcttgctgttaaggcgggcaggattagtgaatttaat
ggaaagacagtgagcaccattggatcaagtcagctgttcattgacccagattttgttgaa
gctgagaaactgaagaactggtttgagagagaaggaaagagtgtcccttgtatctcctta
tctcgggagttttccggcagtggcaaagtagatgttcgtaagacaatatctcaaattaaa
gatgagaaactaggaacctccgaaaaaccagactggatcacagtcagtgccacaatttta
tacttgaagtttgataacttctgctacacagcttgtcctatcatgaacggtgatcgtcca
tgcagcaaaaaggtaacagacaatggagatgggacatggcggtgcgaaaagtgtgataaa
agcgttgatgaatgtgactacaggtatatactgcagcttcagatacaggaccatacagat
cttacttgcgtcacagcattccaggaggctggtgaagagataatgggcatatctgctaaa
gatttgtattatgtgaagaatgaacacaaggatgaggaaaaattcgaagatatcatccgt
aaggttgcttttaccaagtacaacttcaagctgaaggtaaaagaagaaacattcagcgac
gaacagcgtgtgaaagcaacagttgtgaaagtggacaagctaaactattcagcagatacc
aggactatgttaggtgctatggataaactcaggaccagagatgcaaattctcttcccatt
aacccagaaggatccgattacaatgctgatgtggttaatactggtataggaagctcagga
accagagatccctcatcggtccaaagaagggatttcggtttacatgcgcatcaatcgggt
caatctgggaatcactatagtggtggtggtgctactactagctgcaatgtctgtggaaac
agtggtcatgtttctgcaaagtgtccaggcgctactaagccgcaagagcaagggcagtac
atgggtggctcttacagaggcacgacggggagttatggaggaggactaccgagacaacat
gttggaagctactga
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integrated database retrieval system
