Arabidopsis thaliana (thale cress): AT4G21070
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Entry
AT4G21070 CDS
T00041
Symbol
BRCA1
Name
(RefSeq) breast cancer susceptibility1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT4G21070 (BRCA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT4G21070 (BRCA1)
04121 Ubiquitin system [BR:
ath04121
]
AT4G21070 (BRCA1)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT4G21070 (BRCA1)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT4G21070 (BRCA1)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
AT4G21070 (BRCA1)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
AT4G21070 (BRCA1)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
AT4G21070 (BRCA1)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
AT4G21070 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-HC5HC2H_2
zf-C3HC4_3
RTT107_BRCT_5
zf-RING_5
zf-C3HC4_4
zf-RING_6
zf-RING_10
PTCB-BRCT
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
827854
NCBI-ProteinID:
NP_193839
TAIR:
AT4G21070
UniProt:
Q8RXD4
LinkDB
All DBs
Position
4:11247991..11252757
Genome browser
AA seq
941 aa
AA seq
DB search
MADTSHLERMGRELKCPICLSLYNSAVSLSCNHVFCNACIVKSMKMDATCPVCKIPYHRR
EIRGAPHMDSLVSIYKNMEDASGIKLFVSQNNPSPSDKEKQVRDASVEKASDKNRQGSRK
GRASKRNEYGKTKEIDVDAPGPIVMKPSSQTKKRVQLLQNLSAESLTKPTESVETAEKPK
DYTENTVIRLDEHPSLNKEGNLSPFFWLRDEDDGENSSQRTESDQLLGTTPVNVPSFSDL
MDSDHESPSKEDEQQKPNPGDMFDSEMFEWTQRPCSPEILPSPVKAKVLGRDEIDLTQKK
LPKVKVASSKCKNRKAGSARNTVARRSIGVSQEDNMESSAAATISEQQDSRGTSGTIIRN
DVNTDENVKAKRATRSKAQSTRVQSDLNVSNEADGKQGTKRKRSSIKSSPAHPIAGPNEL
SLGTEIVGKGDQDQAHGPSDTHPEKRSPTEKPSLKKRGRKSNASSSLKDLSGKTQKKTSE
KKLKLDSHMISSKATQPHGNGILTAGLNQGGDKQDSRNNRKSTVGKDDHTMQVIEKCSTI
NKSSSGGSAHLRRCNGSLTKKFTCAFCQCSEDTEASGEMTHYYRGEPVSADFNGGSKVIH
VHKNCAEWAPNVYFNDLTIVNLDVELTRSRRISCSCCGLKGAALGCYNKSCKNSFHVTCA
KLIPECRWDNVKFVMLCPLDASIKLPCEEANSKDRKCKRTPKEPLHSQPKQVSGKANIRE
LHIKQFHGFSKKLVLSCSGLTVEEKTVIAEFAELSGVTISKNWDSTVTHVIASINENGAC
KRTLKFMMAILEGKWILTIDWIKACMKNTKYVSEEPYEITMDVHGIREGPYLGRQRALKK
KPKLFTGLKFYIMGDFELAYKGYLQDLIVAAGGTILRRRPVSSDDNEASTIVVFSVEPSK
KKTLTQRRSDAEALAKSARARAASSSWVLDSIAGCQILVLI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggacactagtcacctggagaggatgggaagagaactcaagtgccctatttgcttg
agtctatataattctgcagtttcactttcgtgtaaccatgtattttgcaatgcgtgtata
gtgaaatctatgaaaatggatgctacttgtcctgtttgtaaaatcccttaccatcgtaga
gagattcgaggtgctccacatatggatagcttggtgagcatttacaagaacatggaagat
gcttctgggattaaattattcgttagccagaataatccgtcaccatcagataaagaaaag
caagtaagagatgcttccgttgaaaaggcaagtgataagaatcgtcagggatctaggaag
ggccgagcatccaagaggaacgagtatgggaaaaccaaggaaatagatgtagatgcacct
gggcctattgttatgaaaccttcatcccaaaccaagaagagggtgcagctgctccagaat
ctgtctgctgaaagtttaactaaacctactgagtctgttgaaacagctgaaaaacccaag
gactacactgaaaacactgtgattcgtttggatgagcatccatctctgaataaagaagga
aatctttcacccttcttttggttgagagatgaagatgatggggagaactcaagtcagcgt
acagaaagtgatcaacttttagggactacaccagttaatgttccctctttcagcgatttg
atggactcagatcatgagagcccatcgaaggaagacgagcaacaaaagcccaatccaggt
gacatgtttgatagcgaaatgtttgaatggactcagaggccttgttctccggagattcta
cctagtcctgtgaaggccaaggtcctaggtagagatgagattgatcttactcaaaagaag
ctacctaaagttaaagttgcatcatccaaatgtaaaaaccgcaaagcaggaagtgcaaga
aatacagttgctagacgaagcattggggtttcacaagaggacaacatggaatcatctgca
gcagcaaccattagtgagcaacaagatagtcgtgggacttctggcacaattatcaggaat
gatgtgaatactgatgaaaatgtgaaagctaaaagagctacaagaagcaaggctcagagt
acacgagttcagtctgatctaaatgtatccaatgaagctgatgggaagcaggggacaaag
aggaaaagatctagcattaaatcctctccagctcacccaatcgcaggacctaatgagctc
tcacttggaacagaaattgtgggaaagggggatcaggatcaagcccatggtccatctgat
acacatcctgaaaaacgaagtcccaccgagaaaccctctctgaagaagaggggaagaaaa
tccaatgcaagctcctctttaaaagatctatctggaaaaacacaaaagaagacttcagag
aagaaattgaaactagattcccatatgatctcaagcaaagctacacaaccgcatggaaat
ggtattctaactgctgggttgaatcaagggggtgataaacaagattcaagaaacaatagg
aaatccactgtgggtaaagacgatcataccatgcaagttatagagaaatgctcaacgata
aacaagtcttcatctggaggcagtgcacatttgcgacgatgtaatggatctttaacgaag
aaattcacatgtgccttttgtcagtgttcagaagacacagaggcttcaggagaaatgact
cactactacagaggtgaacctgtctctgcggattttaatggtgggtctaaggtcatacat
gttcacaaaaactgtgctgaatgggctccaaatgtatacttcaacgaccttaccatagtg
aatcttgatgtggagttgacaagaagccggagaataagttgcagctgctgtgggcttaaa
ggcgcagcacttggttgttacaataagagttgcaagaatagttttcatgttacgtgtgca
aaactcataccagaatgcagatgggacaatgtaaaatttgtaatgctatgccctttggat
gcatccattaagttgccctgtgaagaggctaattcaaaagacaggaaatgcaagcgtact
cctaaagaaccactgcactctcagcctaaacaagtatctggaaaagctaacatccgtgag
ctccatatcaagcagttccatggattttccaagaaattggtcttatcttgctcagggctc
acagttgaagagaagactgttattgcagaatttgcggaactgtctggagttacgatctca
aaaaactgggattcaactgttacacatgttattgcatcaatcaatgaaaacggagcctgc
aaaaggaccctcaaattcatgatggcaatcttggaggggaaatggatactaaccattgat
tggattaaggcgtgtatgaaaaatacaaaatatgtaagcgaggagccatatgagatcact
atggatgttcatggaatacgagaaggaccttatcttggaagacaaagagctttgaaaaag
aagccaaaactttttactggacttaagttttacatcatgggagatttcgagcttgcttac
aaaggatatcttcaagatctgattgtagcagcaggaggaacaatcttgcgtaggcggcct
gtttcttctgatgataatgaagcttcaacaatcgtagtatttagtgttgagcctagcaag
aagaaaactctgacccaaagaagatctgatgctgaagccttggctaaatctgctagagcc
agagctgcaagcagttcatgggttttggattctattgcaggttgccaaattttagtcttg
atataa
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