Arabidopsis thaliana (thale cress): AT4G21560
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Entry
AT4G21560 CDS
T00041
Symbol
VPS28-1
Name
(RefSeq) vacuolar protein sorting-associated protein-like protein
KO
K12184
ESCRT-I complex subunit VPS28
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT4G21560 (VPS28-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G21560 (VPS28-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT4G21560 (VPS28-1)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
AT4G21560 (VPS28-1)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT4G21560 (VPS28-1)
Exosomal proteins of other body fluids (saliva and urine)
AT4G21560 (VPS28-1)
Exosomal proteins of colorectal cancer cells
AT4G21560 (VPS28-1)
Exosomal proteins of bladder cancer cells
AT4G21560 (VPS28-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
828241
NCBI-ProteinID:
NP_001320024
TAIR:
AT4G21560
UniProt:
O65421
A0A178UVB3
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All DBs
Position
4:complement(11468666..11470569)
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AA seq
209 aa
AA seq
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MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLS
ASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQN
FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASDE
LTEQQARQLHFDLESSYNSFMAALPNAGN
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaagttatggaatgataagcgtgagagagaaatgtatgagaatttcgcagag
ctttatgctatcatcaaagctactgagaagctcgagaaggcttatattcgtgatctaatc
tctccatctgaatacgaaaccgagtgccagaaactcattgttcacttcaagacattatct
gcatctctcaaagatatggtcccaaacattgagagatttgcagagacgtacaagatggat
tgctcagctgcagtttatcgccttgtgacttctggtgttccagctactgtggagcataga
gctgctgcttcggcttctacatcaagctctgcttctgttgttgctgagtgtgttcagaac
ttcatcacttccatggattctttgaaactcaacatggttgctgttgatcaggtgtatccg
ttgttgtctgatctctcggcttctcttaacaaactaagtatattgccaccagatttcgag
gggaagattaagatgaaggaatggcttttgaggctgtcaaagatgggagcttcagatgaa
ctcactgagcagcaggctcggcaacttcactttgatcttgagtcatcctataactcgttc
atggctgctttgcctaatgctggtaattaa
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integrated database retrieval system
