Arabidopsis thaliana (thale cress): AT4G21710
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Entry
AT4G21710 CDS
T00041
Symbol
NRPB2
Name
(RefSeq) DNA-directed RNA polymerase family protein
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03020
RNA polymerase
ath03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AT4G21710 (NRPB2)
09124 Replication and repair
03420 Nucleotide excision repair
AT4G21710 (NRPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT4G21710 (NRPB2)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT4G21710 (NRPB2)
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AT4G21710 (NRPB2)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AT4G21710 (NRPB2)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AT4G21710 (NRPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
828259
NCBI-ProteinID:
NP_193902
TAIR:
AT4G21710
UniProt:
P38420
A0A178V2G7
LinkDB
All DBs
Position
4:complement(11535404..11542405)
Genome browser
AA seq
1188 aa
AA seq
DB search
MEYNEYEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAENQNRPPS
TMFVRMLARASAKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADT
QMMELLRPSLEEAFVIQNQLVALDYIGKRGATVGVTKEKRIKYARDILQKEMLPHVGIGE
HCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RSYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPSVIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDNQKLLIKKRDIYALQQRESAEEDGWHHL
VAKGFIEYIDTEEEETTMISMTISDLVQARLRPEEAYTENYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRGSTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSSRYTRRDHSI
SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
PWTIEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
HKCGYQMRGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEVCGLIAIANLKKNSF
ECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKHLKSAKGRQ
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggagtacaacgaatacgaacctgaacctcaatatgtagaagacgatgacgatgaggag
attacccaggaggacgcgtgggctgttatatctgcttatttcgaagagaaaggtctcgtt
cgtcaacagctggattcgtttgatgagtttattcaaaatactatgcaagaaatcgttgat
gagtctgctgatatcgagatccgacctgaatctcagcataatcctggccatcagtccgat
tttgcggagacaatctacaagattagctttggacagatttatctgagtaaacctatgatg
acagagtctgatggagagactgccaccctgttccctaaggctgcaaggttgagaaatctc
acatactctgcgcctttgtatgtcgatgttactaagagagttattaagaaagggcatgat
ggtgaagaagttacggagacacaggattttactaaagttttcattggaaaggttcccatc
atgctccggtctagttactgtaccttgtttcagaactcggagaaagacctgacagagctt
ggagaatgtccttatgatcagggtggatacttcattattaatggcagtgaaaaggttctg
attgctcaggagaagatgagtacgaatcatgtttatgtgttcaagaaaaggcagccaaat
aagtatgcttatgttggtgaagtccgttctatggctgaaaaccaaaataggcctccaagc
acaatgtttgtgcgtatgcttgctcgtgctagtgcaaaagggggttcatctggacagtat
attcgatgtactcttccatacatcagaacagaaattcctattatcatagtatttcgtgca
ctgggatttgttgccgataaggacatattggaacacatctgctatgattttgccgatacc
cagatgatggagttgctcaggccttccttggaagaagctttcgttattcaaaatcagctg
gttgcacttgactatattggaaaacgtggtgcaactgttggtgtaaccaaggaaaaaagg
ataaagtatgctagagatatccttcagaaagaaatgcttcctcatgtaggaattggggag
cattgcgagacaaagaaagcttactattttgggtatatcatacaccggctgctgctttgt
gcacttggccgaaggccagaagatgatagggatcattatggtaacaaaaggctggatctt
gctggtcctttacttggagggctatttagaatgcttttccgaaagttaacaagggatgtg
agatcttatgttcaaaagtgcgttgacaatggcaaagaagtcaatcttcaatttgccatt
aaggctaaaacaattacctctggcctgaaatattctcttgctactgggaactggggccag
gcaaacgctgctggcacaagagctggagtctctcaggttcttaaccggttgacatatgct
tcgactttgtcacatctgaggcgtctcaattctccaataggacgtgaaggaaaattggca
aaaccaagacaactgcacaactcacagtggggaatgatgtgccctgctgaaacacctgaa
ggacaggcttgtggtctagtgaaaaacttggctctcatggtctacataacagttgggtca
gctgcttatcctatattggaatttttggaagaatggggtactgagaattttgaggaaata
tctccatctgttataccccaagccacaaaaatctttgtcaatggaatgtgggttggagtt
catagagatcctgacatgttggtgaaaacgttgagacgtttgagacgaagggttgatgtc
aacactgaagttggtgtagttagagatatccgtcttaaagagctccggatatacactgat
tatggacgttgtagccgtccgttgtttattgtagataatcagaagctcttaataaagaag
agagatatctatgctctgcaacaaagggaaagtgcagaagaagatggttggcatcatctg
gttgctaagggctttatagaatacatagacacagaagaagaggaaacgaccatgatttcc
atgactatcagtgatctggttcaagctagactccgcccagaagaggcttatactgaaaac
tacacacattgtgagattcacccatctctgatattgggggtctgtgcttcaatcatacca
tttcctgaccataatcagtcacctcgtaatacatatcaatctgccatggggaagcaagca
atgggaatttatgtcaccaactaccaatttcgcatggatacgttagcttatgttctctat
tatccacaaaagcctttggttactacaagagctatggagcatcttcactttagacaactt
ccagcaggaattaatgctattgttgccatttcttgctattctggatataatcaagaagat
tctgtcatcatgaatcagtcttcaatagatcgtggtttctttcgatccttgttctttcgg
tcttacagagatgaggagaaaaaaatggggacgcttgtcaaagaagactttgggcgccca
gacagaggaagtacaatgggtatgcgacatggttcttatgataaactggatgatgatggt
cttgcgcctcctggtactagagtttcaggtgaagatgttatcattgggaaaaccactcca
atatctcaagatgaggctcaaggacaatcatcccgatacactagacgtgatcatagtata
agcttgcgacatagtgaaactggaatggtggatcaggtgttattgactacaaatgcagat
ggtttgaggtttgtgaaagtgagggtcagatccgtgcggattcctcaaattggagacaaa
tttagtagtagacacggtcagaagggaactgttggcatgacctacacgcaggaggatatg
ccatggacgattgaaggggtcactccggacattattgtgaatccacatgctattccgtct
cgaatgacaattggacagctaattgagtgcatcatgggaaaagtggcagctcacatggga
aaagaaggagatgctactccctttacagatgtcacggtggataatataagcaaagccctt
cataagtgtgggtaccaaatgcgtggatttgagagaatgtacaatggtcacacgggcaga
ccactcacagctatgatattccttggaccaacatattaccaaagattgaagcatatggtt
gatgacaagattcactcgcgtggacgaggtccggtgcaaatcttaacaagacaaccagct
gaagggcgatcacgtgatggtggtctccgttttggagaaatggagcgcgattgcatgatt
gcacatggtgctgctcactttttgaaagagaggctgtttgatcagagtgatgcgtatagg
gtacatgtgtgtgaagtctgcgggctcattgccattgcaaatctgaagaagaattctttt
gaatgcagaggttgcaagaacaaaacagatattgttcaggtatacattccatatgcttgc
aaattactctttcaagagcttatgtcaatggctattgcaccaaggatgctcactaaacac
ctgaaatcggctaaaggcagacagtga
DBGET
integrated database retrieval system
