Arabidopsis thaliana (thale cress): AT4G22090
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Entry
AT4G22090 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT4G22090
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AT4G22090
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
828298
NCBI-ProteinID:
NP_193940
TAIR:
AT4G22090
UniProt:
O65457
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Position
4:complement(11704003..11706042)
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AA seq
394 aa
AA seq
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MTHFTVSCLLVALFLCQSLVHAAYNGYYGYSPAAAPYPAEEPQNIMNPVDSCWRLKSDWD
VNREDLADCAVGFGSSTLGGKKGNIYVVTNPYDNAQNPHPGSLRYGVIQAKPLWITFAKD
MVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKSGKVRS
SPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQHDK
VMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSA
DPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDVFKNGAFFVPSGYGSIPLP
YSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPCY
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgactcatttcaccgtttcgtgcctcctcgtggcactattcttatgtcagtccttggtc
catgccgcatataacggttattacgggtatagccccgcggctgcaccctaccccgccgaa
gaacctcagaacatcatgaatccggtggactcctgttggcggctcaagtctgactgggat
gtcaatcgtgaagacctagcagattgcgcggttgggtttggttcatctaccttgggtggc
aagaaaggtaatatatatgttgtcacaaacccttacgacaatgcacaaaacccccaccca
ggttctttgcggtacggcgtgatccaagccaagccattgtggattactttcgctaaggat
atggtcataaccctagcgaatgagctcatggtcaatagctataagaccatagatgggcga
ggggcaaaagtagaaattgcatacggaccatgcatcacgatacaagacgtgacgaacgtc
attgtgcatgggatcagtatccacgactgcaaaccagggaaatctggaaaggtgaggagc
agcccgacgcatgtcggtcaccgtaagggatcggacggtgatgccatcactatttttggt
tcgtcgaatgtttggatcgatcattgttacctagcgagttgtacggacggactcatcgat
gtaatccatgcttccacggcaatcactatttccaacaactatttcactcagcatgacaaa
gtgatgttgctcggacacaacgataattttgtgaaagatgtgaaaatgaaagtgaccgtg
gcattcaatcattttggaccaggacttgtggagagaatgccaagggtaagacgaggctac
gctcatgtggcaaacaatagatacgataaatggataatgtatgcaattggtggtagcgcc
gatcccaccattttcagtgaaggcaactatttcattgcttctgataaatcttacagcaaa
gaggtgacgaagagagaagtaaaaggaggatggaacaattggagatggagaacctcaaac
gatgttttcaagaacggagctttcttcgtaccttctggttatggcagcattccgctaccg
tacagttctgctcagcgattcacagtcgctcccggaaacttggttccttctttaaccgca
gacgctggccctctaaactgcaaccgcaacggtccttgttattag
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