Arabidopsis thaliana (thale cress): AT4G22350
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Entry
AT4G22350 CDS
T00041
Name
(RefSeq) Ubiquitin C-terminal hydrolases superfamily protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT4G22350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT4G22350
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
AT4G22350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
828330
NCBI-ProteinID:
NP_001190799
TAIR:
AT4G22350
UniProt:
F4JL64
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All DBs
Position
4:complement(11803768..11807417)
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AA seq
539 aa
AA seq
DB search
MKGEREVKNGVSEEEREVKRKRVMERSDSPPPPLGFNNPLLPFANAYDDDNNQQNKSQTR
CNVVAKGEGNGNKVKGEAQVEVDDDEDDDDDASKGRGKHSRHVEVRRDCPYLDTVNRQVL
DFDFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLTEKVYCLP
DSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFV
NVTIQSLMRVTPLRNFFLIPENYQHCKSPLGHRFGELTRKIWHARNFKGQVSPHEFLQAV
MKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEYQGNEN
KEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRPKLARMRY
RVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSKYN
LIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQQEE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgaaagagaagtgaagaatggtgtttctgaggaagagagagaggtgaagagg
aagagagtgatggaacggtctgattcgccacctccaccactaggtttcaacaatcctctt
ttgccgtttgctaatgcttacgatgatgataataaccagcagaataaatcgcaaactcgt
tgtaatgtagttgcgaaaggagagggaaatggtaacaaagtgaaaggagaagctcaagta
gaggtcgatgacgacgaagatgatgatgatgatgcttcgaaggggagaggaaagcattca
cgccatgttgaagttcgtcgtgattgtccttatcttgatactgttaatcgtcaggtgttg
gattttgatttcgagaggttttgctctgtctcattgtcaaatctgaatgtgtatgcgtgt
cttgtttgtgggaagtactttcaaggaagaagccagaagtctcatgcttatacacatagc
ttggaagcaggacaccacgtttacatcaatcttctgacagagaaggtttattgtcttcct
gatagttacgagatcaatgacccttctttggatgacattcgccatgttttaaacccaagg
tttagtagagcacaagtaaacgagcttgacaagaataggcagtggtctagggctcttgat
ggctccgactatcttccaggaatggtggggttgaacaacatacaaaagacagagtttgtg
aatgttacaatccagtcgttgatgagagttactcctctaaggaatttcttcctcattcct
gaaaattatcagcactgcaagtctcctcttggtcaccgttttggggaactaactcgcaag
atttggcatgctcgaaactttaaaggacaagtgagtccacatgagttcttgcaagctgtc
atgaaagccagcaagaaacgctttaggattggccaacaatcagatccagtagagtttatg
tcgtggctcctcaacactttgcacatggatcttagaacttcaaaggacgctagcagtatc
atccacaagtgcttccagggtgagttggaggttgtgaaagagtatcaaggcaatgaaaac
aaagaaatctccaggatgccgtttctgatgcttgggctagatttgccaccgcctcctctt
ttcaaagatgtcatggagaaaaacattattccgcaggttgctctattcgatttattgaag
aagtttgatggagaaacggtgacagaggtggttcggcctaagctggccagaatgagatac
cgtgtaatcaaatctcctcgttacttgatgttccatatggttcggttcaagaagaataac
ttcttcaaagagaagaaccctacattggttaacttcccagtgaaggacatggagctgagg
gattacataccatcattgcctagagcaccagaaggggagaatgtgtgttcaaagtataat
ctaatcgctaacattgtacatgatggtaagcctgaggacgggtacttcagagtctttgtg
cagcgcaagtcacaagaactatggtacgagatgcaggatcttcatgttgcagagacactt
ccccagatggtagaactatcggaagcatacatgcagatatatgagcagcaggaagaatag
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