Arabidopsis thaliana (thale cress): AT4G22410
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Entry
AT4G22410 CDS
T00041
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated-like protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT4G22410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT4G22410
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
AT4G22410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
828336
NCBI-ProteinID:
NP_001320032
TAIR:
AT4G22410
UniProt:
F4JL70
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Position
4:complement(11818033..11826143)
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AA seq
369 aa
AA seq
DB search
MVEFQVLDFHFERFCSVSLSNLNVYACLVCGKYFQGRSQKSHAYTHSLEAGHHVYINLLT
EKVYCLPDSYEINDPSLDDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNN
IQKTEFVNVTIQSLMRVTPLRNFFHIPENYQHCKSPLVHCFGELTRKIWHARNFKGQVSP
HEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVK
EFQGNENKEISRMSFLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGETVTEVVRP
KLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGE
KVCSSLFVY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatttcaggtgttggattttcattttgagaggttttgctctgtgtccttgtcc
aatctgaatgtatatgcatgccttgtttgtggaaagtacttccaaggaagaagccagaag
tctcatgcttatacgcatagcttagaagcaggacaccacgtttacatcaatcttctgaca
gagaaggtttattgtcttcctgatagttacgagatcaatgacccttctttggatgacatt
cgccatgttttaaacccaaggtttagtagagcacaagtaaacgagcttgacaagaatagg
cagtggtctagggctcttgatggctccgactatcttccaggaatggtggggttgaacaac
atacaaaagacagagtttgtgaatgttacaatccagtcgttgatgagagttactccttta
aggaatttcttccacattcctgaaaattatcagcactgcaagtctcctcttgttcactgt
tttggggaactaactcgcaagatttggcatgctcgaaactttaaaggacaggtgagtcca
catgagttcttgcaagctgtcatgaaagccagcaagaaacgctttcggattggccaacaa
tcagatccagtagagtttatgtcgtggctcctcaacactttgcacatggatcttagaact
tcaaaggacgccagcagtatcatccacaagtgcttccagggtgagttggaggttgtgaaa
gagtttcaaggcaatgaaaacaaagaaatctccaggatgtcttttctgatgctcggtcta
gatttgccaccgcctcctcttttcaaagatgtcatggagaaaaacattattccgcaggtt
gctctatttgatttattgaagaagtttgatggagaaactgtgacagaggtggttcggcct
aagctggccagaatgagataccgtgtaatcaaatctcctcgttacttgatgttccatatg
gttcggttcaagaagaataacttcttcaaagagaagaaccctacattggttaacttccca
gtgaaggacatggagcttagggattacataccatcattgcctagagcaccagaaggggag
aaggtgtgttcttctttgtttgtctattag
DBGET
integrated database retrieval system
