KEGG   Arabidopsis thaliana (thale cress): AT4G23540
Entry
AT4G23540         CDS       T00041                                 
Name
(RefSeq) ARM repeat superfamily protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ath03009]
    AT4G23540
Ribosome biogenesis [BR:ath03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    AT4G23540
  Pre-60S particles
   Other pre-60S particles
    AT4G23540
SSDB
Motif
Pfam: HEAT_RRP12_N RRP12_HEAT HEAT_GCN1 Adaptin_N HEAT_GCN1_C SPO22 PPP5
Other DBs
NCBI-GeneID: 828454
NCBI-ProteinID: NP_194085
TAIR: AT4G23540
UniProt: F4JNL5
LinkDB
Position
4:complement(12280413..12286486)
AA seq 1131 aa
MAAFEDRADENDEIAFKDGNTDISQQLMDRYGKSSAAQHRHLVATAVAMRSILTSESLPP
SPSAFFAAAISSVDSSTEDPVAVSALLTFLSIVVPLVPSGEISATMARDAVAVLVKPIEE
EGTKLGVASLRAGVKCIGTLLIGFCDLNDWESLQIGFALLLKFAIDKRPKVRRCAQECLE
KLFGSLRSSTVIKEASNTVYALLKEYKPVLSDLSSTKIEEGSKVDSTLKSENAEAAHVLN
VLSATIPFLSAKVSSRVFSELCGLMASQFSPLTRQILKGIDTIFKNSEDKIVVPEIEGLV
TTLTSYLSLHDKNPADTIVHVTTLLKDALEKAYSVEPTLCLSKLPLVCSSLAGLLTSTDD
IASKASTILKDLISSHIDKKKLLTEGSLSNQDEDNVTSGDNINAARCVCSVFESVLNSCD
GIPNEHILTVINLLIEKLGELSYILAKNIILKLADLMKNAIGDTSSSQDLQQCIGSAVVA
MGPVRLLTLLPITLHAESHSCTNAWLIPILRKYIIGASLAYYVDNIVPLAKSLMLASKGA
KKSTHGKELRACGHELLRLLPAFCNYPVDVANKFGSLAKLMVKFIKKKSFMHEAVALSLQ
MLVNQNKGMPKPSTDMGEAKAISEEDATTELERGFHYSKKASTKNMKALASSSTELLQTL
VDVFTVSGTEISADFKAAIGCLASTLDSSVRKKILISLLNKFDPAGESETEGQVNQSNDS
VDEEKENCSSTKTQLKRSAVLDLASSFVEGAKEDLIELIYNLVRQSFQATDEADLYGAYD
TLSRVLQEHGWFCASHFAEVIEMLLSHKTPEDAASSRSRFACLHVLMAHGIQSSTEEENE
KAFLILNEMILTLKEGKEEHRKAACDTLVMVYTTLKNSSSITSDELCPKLINMITGYISG
TSPHIRSGAVSALSALVYKDPEICLSSPELLSSVLSLLHTKSIEIIKAVLGFVKVLVSTS
QAQDLHSLLQNLLYEILPWSSVSRHYFKSKVTIIVEIMVRKCGTRAVQLATPDKHKSFIE
TVLENRSGKSKDKEETNESQTTSIDPSRGPRKRNYREASSETTAKQDGNKFKRQKRTYQQ
HTPASDINQSRTGPQRPGNRSFGKQREASGNNHKSGKETRKPQKNRFRKAT
NT seq 3396 nt   +upstreamnt  +downstreamnt
atggcggcctttgaagacagagcagatgaaaacgatgaaattgccttcaaagatggcaac
actgatatctcccaacagcttatggaccgttacggcaagtcctcagccgctcagcaccgt
catctcgtcgccaccgccgtcgctatgcgctctattctcacctcagagtctcttccacca
tctccttcagctttcttcgcagctgctatatcttctgtcgattcttcaactgaagatccc
gtggccgtttctgctttgcttactttcctttccatagtcgttcctctggttccttcagga
gaaatttcagctactatggctcgagatgctgtggctgttttagtaaaaccaattgaagaa
gaaggaactaaactaggagttgcgagtttgagagctggtgtgaagtgcattgggactttg
cttattggtttctgtgatttgaatgattgggaatctcttcaaattggttttgctttactt
cttaaattcgccattgataaacgtcccaaggttagaagatgtgctcaagagtgtctagag
aagttatttggttctctccgatcatctactgttatcaaggaagctagtaatacagtatat
gctttacttaaagaatataagcctgtcttatctgacttaagctcgacgaagattgaggaa
ggttctaaggttgactcgacgttgaaatccgagaatgcagaggctgctcatgtgctaaat
gtcctcagtgctacaattccatttctatctgccaaagttagttcgagagttttttcagaa
ctttgcgggcttatggcttctcagttttcgccgctgacgaggcaaattctcaaagggatt
gatactatcttcaagaattcggaagataaaattgttgttcctgagatagaaggacttgta
actactttgactagttatttatctttacacgacaagaatcctgctgacactatcgtgcat
gtgaccaccctgttaaaggatgctttggagaaagcctactcagtcgaaccgacattatgt
ctaagtaaacttccactagtttgttcgtcattggcaggccttctgacttccacggacgac
attgcatccaaagcgtcaactatattaaaagacttgatcagtagccacatcgataaaaag
aaacttctgaccgagggaagcttgtctaatcaagacgaggataacgtaaccagtggagac
aatataaatgcagcaagatgtgtatgctctgtctttgagagtgtcctaaactcatgtgat
ggaattccaaatgagcacattttaactgtcataaatcttttgatcgagaaacttggagag
ctttcttatattcttgcaaagaatatcatattaaagcttgccgacttgatgaaaaatgca
atcggagatacttctagctcacaagatcttcagcaatgtattgggtctgcagtggtggca
atgggaccagtaaggctactgacacttcttcctatcactcttcatgctgagagtcactca
tgcacaaatgcttggctaattcctatcttaagaaaatatatcattggagcatctcttgcg
tattatgttgacaacattgttccgcttgcaaaatcactgatgcttgcttctaaaggagct
aaaaagtcaactcacggcaaagagttgcgggcttgtggtcatgagcttctgagactgtta
cctgccttttgtaactatccagttgatgtggccaacaaatttggatcgttagccaaactg
atggttaaatttatcaaaaagaaatctttcatgcatgaagctgtggctctttctctgcag
atgcttgtaaatcagaataaaggaatgcctaagcccagtacagatatgggagaagcaaaa
gccataagcgaagaagatgcaacaacagagcttgaaagaggatttcactattcgaagaaa
gcttcaacgaaaaacatgaaagctttggcatcaagctcgacagagttgcttcaaactctt
gttgatgttttcacagtttcaggcacagagatcagtgcagactttaaggctgcaattgga
tgcttagcttctactctggattcgtcagttaggaaaaagattctgatatccttgctaaat
aagtttgatcctgccggtgaaagcgagactgaggggcaggtcaatcaatcgaatgattct
gtcgatgaagaaaaagaaaactgcagttccacaaagacacagttaaagaggagtgctgtg
ctggatcttgcatcttcatttgttgaaggagccaaggaagatcttattgagttgatttat
aatcttgttcgccaaagttttcaggccaccgacgaggctgatctttatggggcatatgat
actctgagcagagttctacaggaacatggttggttttgtgcatctcattttgcagaggtg
atagagatgttactcagccataaaactccagaggatgcggcttcttctagaagccgattt
gcatgtctccacgtcctaatggctcatggaattcagtcaagcaccgaggaggagaatgag
aaggctttccttattctgaacgagatgatcctgacacttaaagaggggaaagaagaacat
aggaaagcagcttgtgatacactggttatggtgtataccaccctgaaaaattcatcatct
atcaccagtgatgaactttgtcccaaattgattaacatgataacgggttatatttctgga
acgtcgccgcacataaggagtggagcagtgtctgcattatctgccttggtatacaaagac
cctgagatatgcctatcgtcacctgagcttctttcatctgttttatcattgcttcacact
aaatccattgagattataaaagctgttttaggttttgtgaaagttttagtctcaacatcg
caagctcaggacttgcacagtctactgcagaacctcttatacgaaattctcccctggtcg
tctgtttcaagacattattttaagtcgaaggtaacgatcatagttgagattatggtaagg
aagtgcggcacccgcgcagtccagttagccacaccagacaagcacaagagtttcatcgag
acagttttagagaaccgttcggggaaatcaaaagacaaagaagagaccaatgagtcacag
actacatccatcgatccatccagagggccgcggaaaagaaattacagagaagcttcatca
gaaactacagccaaacaagatggcaacaaattcaaacggcaaaagagaacatatcaacaa
cacacacctgcttccgacattaatcaaagtagaacaggaccacagcgccccggtaacaga
agcttcggaaaacaaagggaagcttctggaaacaatcacaagtcaggaaaagagacacga
aagccacagaagaacagattcaggaaagcaacatga

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