Arabidopsis thaliana (thale cress): AT4G23540
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Entry
AT4G23540 CDS
T00041
Name
(RefSeq) ARM repeat superfamily protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT4G23540
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
Other 90S particles
AT4G23540
Pre-60S particles
Other pre-60S particles
AT4G23540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
Adaptin_N
HEAT_GCN1_C
SPO22
PPP5
Motif
Other DBs
NCBI-GeneID:
828454
NCBI-ProteinID:
NP_194085
TAIR:
AT4G23540
UniProt:
F4JNL5
LinkDB
All DBs
Position
4:complement(12280413..12286486)
Genome browser
AA seq
1131 aa
AA seq
DB search
MAAFEDRADENDEIAFKDGNTDISQQLMDRYGKSSAAQHRHLVATAVAMRSILTSESLPP
SPSAFFAAAISSVDSSTEDPVAVSALLTFLSIVVPLVPSGEISATMARDAVAVLVKPIEE
EGTKLGVASLRAGVKCIGTLLIGFCDLNDWESLQIGFALLLKFAIDKRPKVRRCAQECLE
KLFGSLRSSTVIKEASNTVYALLKEYKPVLSDLSSTKIEEGSKVDSTLKSENAEAAHVLN
VLSATIPFLSAKVSSRVFSELCGLMASQFSPLTRQILKGIDTIFKNSEDKIVVPEIEGLV
TTLTSYLSLHDKNPADTIVHVTTLLKDALEKAYSVEPTLCLSKLPLVCSSLAGLLTSTDD
IASKASTILKDLISSHIDKKKLLTEGSLSNQDEDNVTSGDNINAARCVCSVFESVLNSCD
GIPNEHILTVINLLIEKLGELSYILAKNIILKLADLMKNAIGDTSSSQDLQQCIGSAVVA
MGPVRLLTLLPITLHAESHSCTNAWLIPILRKYIIGASLAYYVDNIVPLAKSLMLASKGA
KKSTHGKELRACGHELLRLLPAFCNYPVDVANKFGSLAKLMVKFIKKKSFMHEAVALSLQ
MLVNQNKGMPKPSTDMGEAKAISEEDATTELERGFHYSKKASTKNMKALASSSTELLQTL
VDVFTVSGTEISADFKAAIGCLASTLDSSVRKKILISLLNKFDPAGESETEGQVNQSNDS
VDEEKENCSSTKTQLKRSAVLDLASSFVEGAKEDLIELIYNLVRQSFQATDEADLYGAYD
TLSRVLQEHGWFCASHFAEVIEMLLSHKTPEDAASSRSRFACLHVLMAHGIQSSTEEENE
KAFLILNEMILTLKEGKEEHRKAACDTLVMVYTTLKNSSSITSDELCPKLINMITGYISG
TSPHIRSGAVSALSALVYKDPEICLSSPELLSSVLSLLHTKSIEIIKAVLGFVKVLVSTS
QAQDLHSLLQNLLYEILPWSSVSRHYFKSKVTIIVEIMVRKCGTRAVQLATPDKHKSFIE
TVLENRSGKSKDKEETNESQTTSIDPSRGPRKRNYREASSETTAKQDGNKFKRQKRTYQQ
HTPASDINQSRTGPQRPGNRSFGKQREASGNNHKSGKETRKPQKNRFRKAT
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctttgaagacagagcagatgaaaacgatgaaattgccttcaaagatggcaac
actgatatctcccaacagcttatggaccgttacggcaagtcctcagccgctcagcaccgt
catctcgtcgccaccgccgtcgctatgcgctctattctcacctcagagtctcttccacca
tctccttcagctttcttcgcagctgctatatcttctgtcgattcttcaactgaagatccc
gtggccgtttctgctttgcttactttcctttccatagtcgttcctctggttccttcagga
gaaatttcagctactatggctcgagatgctgtggctgttttagtaaaaccaattgaagaa
gaaggaactaaactaggagttgcgagtttgagagctggtgtgaagtgcattgggactttg
cttattggtttctgtgatttgaatgattgggaatctcttcaaattggttttgctttactt
cttaaattcgccattgataaacgtcccaaggttagaagatgtgctcaagagtgtctagag
aagttatttggttctctccgatcatctactgttatcaaggaagctagtaatacagtatat
gctttacttaaagaatataagcctgtcttatctgacttaagctcgacgaagattgaggaa
ggttctaaggttgactcgacgttgaaatccgagaatgcagaggctgctcatgtgctaaat
gtcctcagtgctacaattccatttctatctgccaaagttagttcgagagttttttcagaa
ctttgcgggcttatggcttctcagttttcgccgctgacgaggcaaattctcaaagggatt
gatactatcttcaagaattcggaagataaaattgttgttcctgagatagaaggacttgta
actactttgactagttatttatctttacacgacaagaatcctgctgacactatcgtgcat
gtgaccaccctgttaaaggatgctttggagaaagcctactcagtcgaaccgacattatgt
ctaagtaaacttccactagtttgttcgtcattggcaggccttctgacttccacggacgac
attgcatccaaagcgtcaactatattaaaagacttgatcagtagccacatcgataaaaag
aaacttctgaccgagggaagcttgtctaatcaagacgaggataacgtaaccagtggagac
aatataaatgcagcaagatgtgtatgctctgtctttgagagtgtcctaaactcatgtgat
ggaattccaaatgagcacattttaactgtcataaatcttttgatcgagaaacttggagag
ctttcttatattcttgcaaagaatatcatattaaagcttgccgacttgatgaaaaatgca
atcggagatacttctagctcacaagatcttcagcaatgtattgggtctgcagtggtggca
atgggaccagtaaggctactgacacttcttcctatcactcttcatgctgagagtcactca
tgcacaaatgcttggctaattcctatcttaagaaaatatatcattggagcatctcttgcg
tattatgttgacaacattgttccgcttgcaaaatcactgatgcttgcttctaaaggagct
aaaaagtcaactcacggcaaagagttgcgggcttgtggtcatgagcttctgagactgtta
cctgccttttgtaactatccagttgatgtggccaacaaatttggatcgttagccaaactg
atggttaaatttatcaaaaagaaatctttcatgcatgaagctgtggctctttctctgcag
atgcttgtaaatcagaataaaggaatgcctaagcccagtacagatatgggagaagcaaaa
gccataagcgaagaagatgcaacaacagagcttgaaagaggatttcactattcgaagaaa
gcttcaacgaaaaacatgaaagctttggcatcaagctcgacagagttgcttcaaactctt
gttgatgttttcacagtttcaggcacagagatcagtgcagactttaaggctgcaattgga
tgcttagcttctactctggattcgtcagttaggaaaaagattctgatatccttgctaaat
aagtttgatcctgccggtgaaagcgagactgaggggcaggtcaatcaatcgaatgattct
gtcgatgaagaaaaagaaaactgcagttccacaaagacacagttaaagaggagtgctgtg
ctggatcttgcatcttcatttgttgaaggagccaaggaagatcttattgagttgatttat
aatcttgttcgccaaagttttcaggccaccgacgaggctgatctttatggggcatatgat
actctgagcagagttctacaggaacatggttggttttgtgcatctcattttgcagaggtg
atagagatgttactcagccataaaactccagaggatgcggcttcttctagaagccgattt
gcatgtctccacgtcctaatggctcatggaattcagtcaagcaccgaggaggagaatgag
aaggctttccttattctgaacgagatgatcctgacacttaaagaggggaaagaagaacat
aggaaagcagcttgtgatacactggttatggtgtataccaccctgaaaaattcatcatct
atcaccagtgatgaactttgtcccaaattgattaacatgataacgggttatatttctgga
acgtcgccgcacataaggagtggagcagtgtctgcattatctgccttggtatacaaagac
cctgagatatgcctatcgtcacctgagcttctttcatctgttttatcattgcttcacact
aaatccattgagattataaaagctgttttaggttttgtgaaagttttagtctcaacatcg
caagctcaggacttgcacagtctactgcagaacctcttatacgaaattctcccctggtcg
tctgtttcaagacattattttaagtcgaaggtaacgatcatagttgagattatggtaagg
aagtgcggcacccgcgcagtccagttagccacaccagacaagcacaagagtttcatcgag
acagttttagagaaccgttcggggaaatcaaaagacaaagaagagaccaatgagtcacag
actacatccatcgatccatccagagggccgcggaaaagaaattacagagaagcttcatca
gaaactacagccaaacaagatggcaacaaattcaaacggcaaaagagaacatatcaacaa
cacacacctgcttccgacattaatcaaagtagaacaggaccacagcgccccggtaacaga
agcttcggaaaacaaagggaagcttctggaaacaatcacaagtcaggaaaagagacacga
aagccacagaagaacagattcaggaaagcaacatga
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