Arabidopsis thaliana (thale cress): AT4G23850
Help
Entry
AT4G23850 CDS
T00041
Symbol
LACS4
Name
(RefSeq) AMP-dependent synthetase and ligase family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00061
Fatty acid biosynthesis
ath00071
Fatty acid degradation
ath01100
Metabolic pathways
ath01212
Fatty acid metabolism
ath04146
Peroxisome
Module
ath_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AT4G23850 (LACS4)
00071 Fatty acid degradation
AT4G23850 (LACS4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AT4G23850 (LACS4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ath01004
]
AT4G23850 (LACS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT4G23850 (LACS4)
Enzymes [BR:
ath01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AT4G23850 (LACS4)
Lipid biosynthesis proteins [BR:
ath01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AT4G23850 (LACS4)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of breast milk
AT4G23850 (LACS4)
Exosomal proteins of breast cancer cells
AT4G23850 (LACS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
EIAV_GP90
Motif
Other DBs
NCBI-GeneID:
828484
NCBI-ProteinID:
NP_194116
TAIR:
AT4G23850
UniProt:
Q9T0A0
LinkDB
All DBs
Position
4:complement(12403454..12408421)
Genome browser
AA seq
666 aa
AA seq
DB search
MSQQKKYIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPDPIEGMDSCWDVFRMSVEKYPN
NPMLGRREIVDGKPGKYVWQTYQEVYDIVMKLGNSLRSVGVKDEAKCGIYGANSPEWIIS
MEACNAHGLYCVPLYDTLGADAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVV
SFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKG
VMISNESIVTLIAGVIRLLKSANEALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFW
RGDVKLLIEDLAELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFIFDSAFSYKFGYMK
KGQSHVEASPLFDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGL
TESCAGTFVSLPDELGMLGTVGPPVPNVDIRLESVPEMEYDALASTARGEICIRGKTLFS
GYYKREDLTKEVLIDGWLHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIYG
EVQAVDSVWVYGNSFESFLIAIANPNQHILERWAAENGVSGDYDALCQNEKAKEFILGEL
VKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDEMYKTINA
KFASRG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcagaagaaatacatcttccaagttgaagaaggcaaagaaggtagcgatgga
agaccatcagttggtccagtgtaccggagtatctttgccaaggacggatttcccgacccg
atcgaaggaatggatagttgttgggatgttttccgcatgtctgttgagaagtatccaaac
aatccaatgctgggacgccgcgagattgtagatggaaagccgggtaagtatgtctggcaa
acataccaagaagtctacgacattgtcatgaaacttggaaattctctcagaagtgttgga
gttaaggacgaagcaaaatgtggtatctatggtgcaaattctcctgagtggattatcagc
atggaggcttgtaatgcacatggactctattgtgtaccgttatatgatacactaggtgct
gatgctgtggaattcatcatttcccattcagaggtttcaattgtctttgtggaagagaag
aagatctctgagttgttcaagacatgcccaaactcgacagagtacatgaaaactgttgtg
agcttcgggggtgtctcacgtgaacaaaaagaagaagctgaaacttttgggttggttata
tatgcttgggatgaatttttgaagctgggtgaaggaaagcaatatgatctcccaatcaaa
aagaaaagcgacatttgcacgattatgtatacgagtggaaccactggtgacccaaaggga
gtgatgatatctaacgaaagcattgtgactctaatcgctggagtgatccgtctactgaaa
agtgctaacgaggctctgactgtgaaagatgtgtatctttcttatcttcctcttgcccac
atctttgaccgagttatcgaggagtgtttcattcaacatggtgctgcaattggcttctgg
cgaggggatgtaaaattgttgatcgaagaccttgctgagcttaaaccaactattttttgt
gctgtacctcgtgtcctggatagagtatactcaggtcttcagaagaagctttctgatggt
ggattcttaaaaaagttcatatttgattctgcattttcctataaatttggttatatgaag
aagggacagtctcatgtggaggcctctccactttttgacaaacttgtgttcagcaaggtt
aaacaaggactcggaggcaatgtgaggattattctatctggagctgctcctcttgctagt
cacgtagagtcatttctaagagtggtggcatgctgtcatgttctccaaggatacggtctt
actgaaagctgtgctggaacttttgtctcgctgccagatgaactaggtatgctcggcaca
gttggtccaccagtgccaaacgttgatatacgccttgaatccgtccccgagatggaatat
gatgctcttgcgagtactgcacgtggtgaaatctgcattcggggaaagacccttttctct
ggttactacaaacgtgaagatctcacgaaagaggttctcattgatggatggctgcacaca
ggtgatgttggtgagtggcaaccagatggaagcatgaagataattgacaggaagaagaat
atctttaaactctcacaaggagagtatgttgcggtggagaacatagaaaacatatacggt
gaagtacaagctgttgattccgtgtgggtgtacggtaacagctttgagtccttcctaata
gctatcgccaacccaaaccagcatatccttgaacgctgggctgcagaaaacggtgtgagt
ggtgactatgacgctctctgtcaaaatgaaaaggcaaaggaattcattctcggagaactt
gttaaaatggccaaagagaaaaagatgaaagggttcgagatcatcaaggcgattcatctt
gacccagtgccatttgacatggaacgagatcttcttacgccgaccttcaaaaagaaaagg
cctcagttgctgaaatactaccagagtgtgatcgacgaaatgtacaagaccataaatgca
aaatttgcttccagagggtag
DBGET
integrated database retrieval system
