Arabidopsis thaliana (thale cress): AT4G24270
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Entry
AT4G24270 CDS
T00041
Symbol
EMB140
Name
(RefSeq) EMBRYO DEFECTIVE 140
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT4G24270 (EMB140)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT4G24270 (EMB140)
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
AT4G24270 (EMB140)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
AT4G24270 (EMB140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
RRM_1
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
828529
NCBI-ProteinID:
NP_001328783
TAIR:
AT4G24270
UniProt:
A0A1P8B5P4
LinkDB
All DBs
Position
4:complement(12581518..12587458)
Genome browser
AA seq
710 aa
AA seq
DB search
MMADDTELVSNTDQKMEDASAENPARADPPSSDDSGDSDSDSEDEAESNQQIVTLESELS
ANPYNYDAYVQYIKLLRKTANLEKLRQAREAMSAIFPLSPSLWLEWARDEASLAASENVP
EIVMLYERGLSDYQSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGFHVT
EGNRIWEGYREFEQGVLATIDEADIEERNKQIQRIRSIFHRHLSVPLENLSSTLIAYKTW
ELEQGIDLDIGSDDLSKVSHQVAVANKKAQQMYSERAHLEENISKQDLSDTEKFQEFMNY
IKFEKTSGDPTRVQAIYERAVAEYPVSSDLWIDYTVYLDKTLKVGKAITHAYSRATRSCP
WTGDLWARYLLALERGSASEKEIYDVFEKSLQCTFSSFEEYLDLYLTRVDGLRRRMLSTR
MLEALDYSLIRETFQQASDYLTPHMQNTDSLLHLHTYWANLELNIGKDLAGARGVWDSFL
KKSGGMLAAWHAYIDMEVHLGHIKEARSIYRRCYTRKFDGTGSEDICKGWLRFEREHGDL
EHFDLAVQKVMPRLEELQLMRLQQESTPVKPSAGLKEHSSQKRKAEQNVEEESLAKRQKR
KSQKEVDLGGQSATVPATKNVKAENGKTADSDKEETEDAKPLKPKVYRDECTAFISNLSV
KAQEEDIRKFFGDDGGVDSIRILHHKDTGKPRVSLLHTPSACDVIFCCHC
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatgacactgaactcgtcagtaacactgaccagaagatggaagacgcttca
gccgaaaaccctgcccgagctgatcccccctcatcggatgattccggcgattctgattcc
gactcagaagatgaagccgagtcgaatcagcagattgtaaccttggagtcggagctctcc
gctaatccttacaactacgatgcttatgtccaatacattaagcttctcaggaaaacagcc
aaccttgaaaagctaagacaagcaagggaagctatgagtgccatatttccgttgagtcct
tccttgtggcttgaatgggcaagggatgaagcgtctttagccgctagtgagaatgtgcct
gaaattgtgatgctttatgaacggggactttctgattatcagtctgtatctctttggtgt
gactacctgagctttatgctagaatttgatccatcagtgcgtggatacccatctgaaggt
atttccaaaatgcggagtctttttgaacgtgctattccggctgcgggcttccatgttact
gaaggcaatagaatatgggaaggatatagagaatttgagcaaggtgtcttagccactatc
gacgaggctgacattgaggagagaaataagcagatacaaaggatcagaagcatattccac
cgtcacctgtctgttcctctagaaaacttgagctccacccttattgcttacaagacttgg
gagttggaacagggcattgaccttgatattggatctgatgatttgagtaaggtttctcat
caggttgctgttgcaaacaagaaggcacagcagatgtatagtgaacgtgcccatcttgaa
gaaaacatatctaagcaagatttatctgacacggaaaagtttcaggaattcatgaattat
ataaagtttgagaagacttctggagatcctacccgagttcaagctatatatgaacgtgct
gtggctgaatacccggtttcaagtgacttgtggatagactacaccgtgtatcttgataaa
actttgaaggttggaaaagctataacgcatgcctattctagggcgactagaagttgtcca
tggactggagatctttgggcacgttatttacttgctttagagcgtggttctgcatccgag
aaagagatttatgatgtctttgagaagtcattgcagtgcacattttcctcctttgaagag
tacctggatttatacctcactcgagtagatggcctgagaaggagaatgttatcaactagg
atgctagaggctttggactattctctgataagagaaacttttcagcaagcatcagattac
ctaacgcctcacatgcaaaatacagacagtttgctacatttgcatacttattgggctaac
ttggaacttaatattggaaaagatctagctggcgcacgaggtgtttgggatagctttctg
aagaagagtggtgggatgctagcagcctggcatgcatacattgatatggaagtgcatttg
gggcatataaaggaagctaggtctatttaccggaggtgctatacaagaaagtttgatgga
actggctcagaagacatatgcaaaggatggttgcgctttgagagggagcatggggatttg
gaacattttgacctagcagttcaaaaggttatgccacgcttggaagagctacaattgatg
aggttacaacaagagtctacaccagtcaaaccgtcagctggtctgaaagagcatagctca
caaaagagaaaagcagaacagaatgtagaagaagagtctttggctaagcggcagaagagg
aaaagtcaaaaagaagtggacctaggtggtcagagtgcaactgtaccagcaacaaaaaac
gttaaagcagagaatggaaaaacagctgattcagataaagaagagacagaagatgccaaa
ccactgaagccgaaagtttatagagacgagtgtacagcttttatttcgaatctcagtgtc
aaggcacaagaggaagatatacgtaaattctttggtgatgatggtggggttgattccatt
cgcattctccatcacaaagacactggaaaaccaagggtctctctcttacacacaccttct
gcatgtgatgtcatcttctgctgtcactgttaa
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