Arabidopsis thaliana (thale cress): AT4G25500
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Entry
AT4G25500 CDS
T00041
Symbol
RS40
Name
(RefSeq) arginine/serine-rich splicing factor 35
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT4G25500 (RS40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT4G25500 (RS40)
Spliceosome [BR:
ath03041
]
Common components
Common spliceosomal components
SR proteins
AT4G25500 (RS40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RNA_bind
Nup35_RRM_2
RRM_Nup35
RBD_AKAP-17A
DUF2129
Motif
Other DBs
NCBI-GeneID:
828654
NCBI-ProteinID:
NP_194280
TAIR:
AT4G25500
UniProt:
P92965
A0A654FSN0
LinkDB
All DBs
Position
4:13024498..13027484
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AA seq
350 aa
AA seq
DB search
MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF
GRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEP
YGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPE
RRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRG
SPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPI
ERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagtcttctgtgggaactttgagtatgatgcgcgcgaaggtgacctggaacga
ctattcaggaaatacggcaaggttgagagggttgatatgaaagctgggtttgcttttgta
tacatggaagatgaaagggatgcggaagatgccatccgagcacttgaccgctttgaattt
gggcgtaagggacgcagacttcgtgttgaatggacaaagagtgaacgtggaggtgataaa
agatctggtggtggttcaaggagatcctcatccagcatgagaccttccaagactctcttt
gtgattaactttgatgcggataatactaggacccgggatctagagaaacactttgagccg
tatggaaagatcgtaaacgttaggatcaggaggaattttgcatttatccagtacgaggca
caagaggatgccaccagagcattggatgcttcaaataacagtaagctgatggataaggtg
atctcggtggagtatgctgtgaaggatgatgatgctagaggaaatggacacagtcctgaa
agacgccgtgataggtcacctgaaaggagaaggcgatcacctagtccttacaaaagagaa
agaggaagccctgattatggccgaggagctagtcctgttgctgcctacagaaaggaaagg
accagtcctgactatggtcgaagacgtagcccaagtccttacaagaaatcaagacgtggc
agtcccgagtatggtcgtgaccgcagaggcaatgatagccctcgcaggagggagagagtc
gcaagccctactaagtacagccgcagtcccaacaacaagagagagaggatgagccctaat
cacagcccgttcaagaaggagagtccgagaaatggggttggtgaagttgaaagtcccatt
gaaaggagagagagatcgaggtctagccccgagaatggccaagttgaaagccctgggtca
ataggaagaagagacagtgatggtgggtatgatggtgcagagagcccaatgcagaagagc
cggtctcctcgttcgccaccagctgacgagtga
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integrated database retrieval system
