Arabidopsis thaliana (thale cress): AT4G26650
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Entry
AT4G26650 CDS
T00041
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
KO
K14411
RNA-binding protein Musashi
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT4G26650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT4G26650
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AT4G26650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
828772
NCBI-ProteinID:
NP_001031725
TAIR:
AT4G26650
UniProt:
F4JV21
LinkDB
All DBs
Position
4:13444797..13448212
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AA seq
452 aa
AA seq
DB search
MEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVF
ADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKK
IFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKT
FHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNN
LGSAGRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIPGNQYFNSASPNRYNS
PIGYNRGDSAYNPSNRDLWGNRSDSSGPGWNLGVSVGNNRGNWGLSSVVSDNNGYGRSYG
AGSGLSGLSFAGNTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGI
DNVGSDPSANASEGYSGNYNVGNRQTHRGIEA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaagatggaatctgcatcggatctgggcaagctcttcattggcgggatttca
tgggacacagatgaagaacgactgcaagagtattttggcaagtatggagatttggttgaa
gctgtgatcatgagagaccgtactaccggacgtgcccgtggctttgggtttatcgttttt
gcagatccttctgttgccgagagagtcatcatggacaaacacatcattgatggccgcacg
gtcgaggcgaagaaagctgtcccgcgggatgatcagcaagtgctaaaacgacacgccagt
ccaatgcaccttatctcacctagccatggtggtaatggtggtggagcacggacaaagaag
atctttgttggaggtttaccgtctagcattactgaggccgagttcaagaactactttgat
cagtttggtacaattgctgatgttgtggtaatgtatgatcataatacacagaggccaaga
ggctttggcttcatcacttttgattccgaagagtctgttgatatggttctccacaagacc
tttcatgagctaaacggaaaaatggttgaggttaaaagagcagtgccaaaggagctctcc
tcgactactcctaaccgaagcccacttattgggtatggtaacaactatggagtagtccct
aataggtcttctgctaatagctacttcaatagttttcctcctggttataataataataat
ctaggctctgctggccggtttagtcctattggtagcggtagaaatgctttctctagcttc
gggctcggattgaatcaagaactgaatttgaattcaaactttgatggaaacactcttggg
tatagccggatccctggcaaccaatacttcaacagtgcttcaccaaaccgttacaactct
ccaattgggtacaacagaggagactctgcttacaacccgagcaacagagacttgtgggga
aacagaagcgattcctctggtccaggttggaacttgggagtttcggttggtaacaacaga
ggaaactggggactttcttctgtggtgagcgataacaatggctatggaagaagctatggg
gctggttctggactttcggggttatcattcgcgggtaatacaaacggttttgatggctct
ataggggaattgtatagaggcagctcagtttatagcgactcaacatggcagcagtcaatg
cctcatcatcagtcttctaatgagttagacggcttgtctcgctcttatggctttggtatt
gacaatgtaggctcagacccatcagccaatgcctcagaaggatactccggaaactacaat
gtcggaaatagacaaacacatagaggtattgaagcatag
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