Arabidopsis thaliana (thale cress): AT4G27040
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Entry
AT4G27040 CDS
T00041
Symbol
VPS22
Name
(RefSeq) EAP30/Vps36 family protein
KO
K12188
ESCRT-II complex subunit VPS22
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
AT4G27040 (VPS22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G27040 (VPS22)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT4G27040 (VPS22)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
AT4G27040 (VPS22)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AT4G27040 (VPS22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
CDK5RAP3
DnaD_N
DUF3631
Exo70_C
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
828812
NCBI-ProteinID:
NP_001328604
TAIR:
AT4G27040
UniProt:
Q5M759
A0A178V291
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All DBs
Position
4:complement(13572885..13575639)
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AA seq
250 aa
AA seq
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MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLSTFRSQLEEFARKHKNDIRKN
PAFRAQFHEMCANIGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSHNGGLISL
QELCNHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHN
QILELAQGQGFVIVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGHKDGKCRYWFPCVS
SVYSSIGSDT
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgacgaccaggaattggaggattacaaaaggccgcagctgctagggatcagtac
cggttactaggagaaaatgtagccaagttacggactgatatgatgaaagaacagctctcc
acgttccgttcccagcttgaagagttcgctcgtaaacacaagaatgacattcgtaagaat
cctgccttcagggctcagttccatgaaatgtgtgctaacattggtgtggatcctcttgct
tctaacaagggtttctgggctgagctccttggtattggtgacttctactatgaacttgga
gttcagattattgaagtttgcatgcttacaagatcacataatggaggtttgatcagcttg
caagagctctgcaaccatcttcgtcagagaaggaagaaagaccgtgaagctgtgactgaa
gatgattgtcttcgagctattagcaagctaaaggtattgggtagcggatttgaggttatc
actattggcaagaaaaagcttgtccgttcagtacccacagagctgaacaaagaccataac
cagattttggagttggctcagggccaaggctttgtgattgtggaagaggtacaaagacgc
ctctcatggacatctggtcgcgttatagatgctctcgaaactttgttagaggagggcctt
gccatgatcgacaatggccataaagacggaaagtgtcggtactggtttccctgtgtttct
tcggtttactcatccatcggatctgatacttaa
DBGET
integrated database retrieval system