Arabidopsis thaliana (thale cress): AT4G27880
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Entry
AT4G27880 CDS
T00041
Name
(RefSeq) Protein with RING/U-box and TRAF-like domain
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT4G27880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT4G27880
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT4G27880
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
AT4G27880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-C3HC4_3
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
828901
NCBI-ProteinID:
NP_194517
TAIR:
AT4G27880
UniProt:
Q9STN8
A0A384KY39
B3LF90
LinkDB
All DBs
Position
4:13883167..13885063
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AA seq
327 aa
AA seq
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METDSMECVSSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYE
LLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLEL
PCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDM
HAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDE
EDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKEL
KLRVTGKIWKEQHSPDSGLSIPNLSSS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggagacagatagtatggagtgcgtctcatctacgggtaatgagatccatcagaatggt
aatggccaccaatcttaccaattctcttcgacgaagactcacggcggagccgctgctgcc
gccgtcgttaccaatattgttggcccaacagcaactgctccggccactagcgtgtatgag
cttctggagtgccctgtctgtacctattctatgtatcctcctatccatcagtgtcataat
ggacatacattgtgctcgacctgtaaagtgagggttcataacaggtgtcccacatgtaga
caagaacttggagatattagatgtttagctcttgagaaagtagccgagtcgcttgagctg
ccttgcaagttttacaatctgggatgtcctgagatctttccttactacagcaaactgaag
cacgagtctctctgtaacttcagaccttacagttgtccttatgctggttcggagtgtggt
atcgtaggggacatcccttttcttgtagcccatctcagggatgatcataaagttgacatg
cacgctggttccacttttaaccaccgctatgtcaaatccaatccgcgtgaagtagagaac
gctacttggatgctaaccgtattccattgctttgggcagtacttctgcctccatttcgaa
gcgttccagcttgggatgggtccagtatacatggcattcctgagattcatgggggacgag
gaagatgcacggagctacagctacagcttagaagtgggaggcagtgggaggaagctaaca
tgggaaggaaccccaagaagcatcagagatagccacaggaaagtaagagacagcaacgac
ggtctcatcatccaaagaaacatggctctctttttctccggtggagacaggaaagagctt
aaacttagagtcactggtaaaatctggaaagagcaacacagtccagattctggactttcc
ataccaaacctatcttcttcctga
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