KEGG   Arabidopsis thaliana (thale cress): AT4G29160
Entry
AT4G29160         CDS       T00041                                 
Symbol
SNF7.1
Name
(RefSeq) SNF7 family protein
  KO
K12194  charged multivesicular body protein 4A/B
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03250  Viral life cycle - HIV-1
ath03272  Virion - Hepatitis viruses
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    AT4G29160 (SNF7.1)
   03272 Virion - Hepatitis viruses
    AT4G29160 (SNF7.1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT4G29160 (SNF7.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT4G29160 (SNF7.1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ath04147]
    AT4G29160 (SNF7.1)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    AT4G29160 (SNF7.1)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT4G29160 (SNF7.1)
  Exosomal proteins of other body fluids (saliva and urine)
   AT4G29160 (SNF7.1)
  Exosomal proteins of colorectal cancer cells
   AT4G29160 (SNF7.1)
SSDB
Motif
Pfam: Snf7 Fusion_gly MACPF_D2 Spatacsin_C
Other DBs
NCBI-GeneID: 829037
NCBI-ProteinID: NP_001078468
TAIR: AT4G29160
UniProt: Q9SZE4 A0A178V100
LinkDB
Position
4:14380660..14382736
AA seq 219 aa
MMNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAI
QCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNID
DVDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLLQPATT
APPLPSVPVPAGRQPARPVPQKRTAEEEELAALQAEMAL
NT seq 660 nt   +upstreamnt  +downstreamnt
atgatgaatcggctattcgggaaacccaagcaggaggctaatgctctccaaactttagac
aagcttaacgagacgcttgagatgctagagaaaaaggagaaagtactcttgaagaaagct
ggtgcagaggttgagaaggcaaaagaatactcccgggctaagaacaaacgagcggctata
cagtgtttgaaaaggaagaggttatatgagggacaagtcgaacagcttgggaatttccag
ctccgtattcatgatcaaatgattatgttagaaggtgcaaaagcaacaaccgaaactgtt
gatgcattgaggagtggagcttctgcaatgaaggcaatgcagaaagcaacaaatattgat
gatgtggataagaccatggacgagatcaatgagcaaaccgagaacatgaaacagatccaa
gaagcattggcgactccaatgggggcagcggctgacttcgacgaggatgagcttgcagca
gagcttgatgaactagaaagtgaagagcttgaatcgcaacttctacagccggcaacaaca
gctcctccattgccttcagttccagtgcctgcagggcgtcaaccggctcgtcctgttccc
cagaagcggactgctgaggaagaagaactcgctgcattacaggctgagatggccctctaa

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