Arabidopsis thaliana (thale cress): AT4G29380
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Entry
AT4G29380 CDS
T00041
Symbol
VPS15
Name
(RefSeq) protein kinase family protein / WD-40 repeat family protein
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
AT4G29380 (VPS15)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ath01001
]
AT4G29380 (VPS15)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G29380 (VPS15)
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
AT4G29380 (VPS15)
Protein kinases [BR:
ath01001
]
Serine/threonine kinases: Other
VPS15 family
AT4G29380 (VPS15)
Membrane trafficking [BR:
ath04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
AT4G29380 (VPS15)
Autophagy
Autophagosome formation proteins
PI3K complex
AT4G29380 (VPS15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
HEAT
PK_Tyr_Ser-Thr
NBCH_WD40
Adaptin_N
Vac14_Fab1_bd
HEAT_EZ
Cnd1
Tti2
Motif
Other DBs
NCBI-GeneID:
829059
NCBI-ProteinID:
NP_194667
TAIR:
AT4G29380
UniProt:
Q9M0E5
LinkDB
All DBs
Position
4:14458648..14465684
Genome browser
AA seq
1494 aa
AA seq
DB search
MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFLKSIQCKHDEGLVVVKVYFKRG
DSIDLREYERRLVKIKDVFLSLEHPHVWPFQFWQETDKAAYLVRQYFYSNLHDRLSTRPF
LSLVEKKWLAFQLLLAVKQCHEKDICHGDIKCENVLLTSWNWLYLADFASFKPTYIPYDD
PSDFSFFFDTRGQRLCYLAPERFYEHGGETQVAQDAPLKPSMDIFAVGCVIAELFLEGQP
LFELAQLLAYRRGQHDPSQHLEKIPDPGIRKMILHMIQLEPEARLSAEDYLQNYVGVVFP
NYFSPFLHTLYCCWNPLPSDMRVATCQGIFQEILKKMMENKSGDEIGVDSPVTSNPMNAS
TVQETFANHKLNSSKDLIRNTVNSKDEIFYSISDALKKNRHPFLKKITMDDLGTLMSLYD
SRSDTYGTPFLPVEGNMRCEGMVLIASMLCSCIRNIKLPHLRREAILLLRSCSLYIDDDD
RLQRVLPYVVALLSDPTAIVRCAAMETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPED
TEESVRICYASNIAKLALTAYGFLIHSFQLSDVGVLNELNSQQISTTPASETPSHLQKAN
GNAQLQQLRKTIAEVVQELVMGPKQTPNVRRALLQDIGELCFFFGQRQSNDFLLPILPAF
LNDRDEQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQALSDQTEAVIVNALECLSTLCK
SSFLRKRALLQMIECVYPLLCYPSQWVRRAVVTFIAASSECLGAVDSYAFIAPVIRSYLS
RLPASIASEEGLLSCLKPPVTREVVYRIFEKTRNPEFMAKQRKMWYSSSPQSKDWESVDL
FDKDAGELNSVECRAEQKQSVEGKKQIKSASKQPEVQGKYAEKDAKLRIPRNPRPNASNT
VELRDPVYPEKLQFSGFMAPYVSGANSFIEPENIPLYSFSMDKRAATNPPVASESSLQMN
SLGMGSLSVPWMDSMSKSFNLASSVPVPKLISGSFHVGTNPKQFYRVVHEPESRENDQIS
SAISKFQDLGVSSSSKSASVTSEDASSPADLVGEPSLSRTSVPDSGWKPRGVLVAHLQEH
RSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGMCTTMLRN
STQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALVSLLNYTADSLS
GPMVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTLW
DLRFRVPVNSWQYPIICPIEKMCLCFLPPSVSVSTTMKPLIYVAAGCNEVSLWNAEGGSC
HQVLRVANYENETDVSEFQWKLPSNKVNPKPNHRQNMSSKYRIEELNEPPPRLPGIRSLL
PLPGGDLLTGGTDLKIRRWDYSSPERSYCICGPSLKGVGNDDFYELKTNTGVQFVQETKR
RPLATKLTAKAVLAAAATDTAGCHRDSVQSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaaaatcgctcgtacgacacaagtctcggcgacggagtactatctccacgac
ttgccgtcttcatacaatctggtcttaaaagaggttttaggtcgaggaagattcctaaag
tcgattcaatgtaagcacgatgaaggattggttgttgttaaggtttacttcaagcgtggt
gactcgatcgatctcagagagtatgagcgtcgtctcgttaagatcaaagatgtgtttttg
tctctagaacatcctcacgtttggccttttcagttttggcaagagactgataaagcagcg
tatctagtgaggcaatacttttacagtaatctacatgatcgcttgagtacgaggcctttc
ctcagtcttgtagagaagaagtggttggcgtttcagttgcttcttgctgtgaagcaatgt
catgagaaggatatatgtcatggtgatatcaagtgcgagaacgtattgttgacttcctgg
aactggctttaccttgctgattttgcatccttcaaacctacatacattccttatgatgat
ccttcagacttctcgttcttctttgacacaaggggacaaagactttgttatctggctcca
gagagattctatgagcatggaggtgagacacaagtagcacaagatgctccattaaagccc
tccatggatatatttgctgtggggtgtgtgatagccgaactttttcttgagggtcagcca
ctatttgaactggcgcagcttctcgcttatcgtagagggcaacatgatcctagccaacac
cttgaaaagattcctgatccgggaattcgcaagatgattcttcatatgattcagttagaa
cccgaagcacgcctatctgctgaagactacctgcaaaattatgtgggagttgttttccca
aactacttctcaccatttctgcacactttatattgttgttggaatccacttccttcagac
atgagggtagcaacttgccaggggatatttcaagaaatacttaaaaagatgatggaaaat
aagtcaggtgatgagatcggcgttgattctcctgtaacttcaaatccaatgaacgcaagc
acagtacaggaaacttttgcaaatcacaaattgaactcatctaaggatttgataaggaat
actgtgaactctaaggatgagatcttttactctatttctgatgcactcaagaaaaatcgc
catcctttcttgaaaaagataacaatggacgatttgggtacactgatgtctctctatgat
agccgttctgacacttatggcacgccttttctaccggtagagggtaacatgagatgtgag
ggaatggttctgattgcatctatgctctgttcttgtatccgcaatatcaagttgcctcat
ttgaggagggaagctatacttctattgagatcttgctctttgtatattgatgatgatgat
cgcttacagcgtgtacttccatacgtcgttgccttgctttctgatccaacagcaatcgtg
cggtgcgctgccatggaaactttgtgtgacattctgccgcttgtccgagattttcctcct
agtgatgcaaagattttcccagagtacatatttccgatgctctccatgcttcctgaagat
acggaagagagtgtgaggatatgctatgccagcaatattgcaaaactcgctcttactgct
tatggattcttgatacattctttccagttgagcgatgtaggggttcttaatgaattgaat
tcccagcagatctccactacacctgctagtgagacccctagtcatttgcaaaaggcaaat
ggcaatgcgcagcttcaacagcttagaaaaactatagctgaagttgttcaagagcttgtt
atgggtccaaaacaaactccaaatgttagaagagcactccttcaggacataggggagctc
tgctttttctttggtcagaggcagagtaatgactttctactaccgatcctccctgccttt
ctaaacgacagagatgagcagctaagatctgtattctttgagaagattgtttatgtatgc
ttttttgttggccagagaagtgtggaggagtatctattgccttatatcgatcaagctttg
agtgatcagacggaggctgttattgtcaatgcattggagtgcttatccacattatgcaag
agtagtttcttgcggaagagagctctcctccaaatgatagagtgtgtttatcctttgttg
tgctatccatctcaatgggtaaggagggcagttgtcactttcattgccgcaagtagtgaa
tgcttaggtgcagtcgactcttatgcttttattgccccagtaatacgctcttatcttagt
agactgcctgcgtcaattgcttctgaggaaggtctactttcatgtttgaagccccctgtc
acaagggaggtagtttatcgtatctttgaaaaaaccaggaacccagaattcatggcgaaa
cagcgaaagatgtggtatagttcttcacctcagtccaaagattgggaatctgttgatttg
tttgacaaagatgctggggagttgaattcagtagaatgcagggccgaacagaagcaaagt
gtggaaggaaaaaaacagattaagagtgcatcaaagcaaccagaagttcaaggaaagtat
gcagaaaaggatgctaaattaagaatcccgagaaacccaagacctaatgcttctaacact
gttgagctacgtgatcccgtgtatccagagaagttacagttctctgggtttatggcacca
tatgtatctggtgcgaatagctttattgaaccagagaacatacctctctattcgtttagc
atggacaaacgagcagctacaaatcctcctgtggcttctgagtcttcattgcagatgaac
tctctgggaatgggttcattgtctgtgccatggatggattccatgagtaaatcatttaac
ttggctagttcggtcccagtgcctaagctgatttctgggtcattccatgtcggtaccaat
cctaaacaattttacagagtggtacatgagccagaaagcagagaaaatgatcaaatctcc
tcagccatcagtaaatttcaagacctcggagtatcaagctcctcaaaaagtgcttctgta
acttcagaagatgcttcttctccagcggatcttgtaggagagccatctctgtcaaggaca
tcggttccggattcagggtggaagcctcgtggagtattagttgctcatctacaagagcat
cgctctgcggtcaatgacattgccacttcaagcgatcatagcttttttgttagtgcatca
gatgattccacagtgaaggtgtgggactctagaaaactggaaaaggacatctcttttagg
tcaaggctaacatatcatctcgagggaagcagagggatgtgcacaacaatgcttcggaat
tcaacgcaagttgtagttggagcctctgatggtgtgatacatatgttttcaattgaccat
atctccagaggcttggggaacgtagtggagaagtattcaggcattgttgatattaaaaag
aaagatgttaaagaaggcgctctagtttctctcttgaattatactgctgatagcctttct
ggtccgatggtaatgtatagtacccaaaactgcggaatccacctttgggatacaaggtca
gatttagatgcatggacactgaaagcaaatcctgaagaaggatatgtgtcttcattggtt
acaagtccttgtgggaattggtttgtctctgggtcttcaaggggagtgcttactctttgg
gatttgagatttcgtgttcctgtaaattcgtggcaataccccatcatatgtcccatagag
aagatgtgcctctgctttcttcctccaagcgtctcagtgtccaccactatgaaaccttta
atttatgttgctgccggttgcaacgaagtttcactctggaatgcagagggaggtagctgt
caccaggtattgagagtagccaattatgaaaatgagacggatgtttccgagtttcaatgg
aagttaccaagcaataaggtaaatccgaagccgaatcatcgtcagaacatgagctccaag
tacagaatcgaagagttgaacgagcctcctcctcgtcttcctggtatccgctctttgctc
cctttacctggaggtgacttgttaacaggtggtactgacttgaagattcggcgttgggat
tactccagccctgagagaagttattgtatatgcggtccgagtttgaaaggagtcggaaat
gatgatttctatgaactaaaaaccaacacgggcgtgcaatttgttcaggagacaaagaga
cggcctctggctactaaactgacggcaaaggcggtacttgcggctgctgcgacagacaca
gcgggttgtcatcgtgactcagttcagtctctggcatctgtgaagctgaaccagagactg
ttgatatcaagcagcagagatggagccataaaggtctggaagtaa
DBGET
integrated database retrieval system
