Arabidopsis thaliana (thale cress): AT4G29730
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Entry
AT4G29730 CDS
T00041
Symbol
NFC5
Name
(RefSeq) nucleosome/chromatin assembly factor group C5
KO
K10752
histone-binding protein RBBP4
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03082
ATP-dependent chromatin remodeling
ath03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AT4G29730 (NFC5)
03083 Polycomb repressive complex
AT4G29730 (NFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT4G29730 (NFC5)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
AT4G29730 (NFC5)
Histone modification proteins
HAT complexes
HATB complex
AT4G29730 (NFC5)
HDAC complexes
Sin3A-HDAC complex
AT4G29730 (NFC5)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
AT4G29730 (NFC5)
PRC2.2
AT4G29730 (NFC5)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
AT4G29730 (NFC5)
Heterochromatin formation proteins
Other heterochromatin formation proteins
AT4G29730 (NFC5)
Chromatin remodeling factors
NuRD complex
AT4G29730 (NFC5)
NuRF complex
AT4G29730 (NFC5)
NuRF complex (fruit fly)
AT4G29730 (NFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
829094
NCBI-ProteinID:
NP_194702
TAIR:
AT4G29730
UniProt:
Q9SU78
A0A654FUH5
LinkDB
All DBs
Position
4:complement(14558927..14562601)
Genome browser
AA seq
487 aa
AA seq
DB search
MESEAAATVQATRPRRAPRTPVTAILTDKRRRKPKSNNESQLPFLLQQSQKATVDDTYSQ
WKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSKTQRLYLSEQTNGSVPNTLVIANCE
TVNRQLNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDR
YAVLGAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNIQDHITMAGSDS
KSPGSSFKQTGEGSDKTGGPSVGPRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLW
DARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVY
KFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKTPDGLFFQHAGH
RDKVVDFHWSLLNPWTIVSVSDNCESIGGGGTLQIWRMSDLIYRPEDEVLTELEKFKSHV
FTCTSKS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaagcagcagcgactgttcaagccaccaggccgagaagagcacctaggact
ccggtgacagccattttgacggataagagaagacggaaacctaagagcaacaacgagtct
cagttaccatttttgctacagcagagtcaaaaggccaccgttgacgacacttactctcag
tggaagactcttcttcccattctctatgattcgtttgttaatcataccctcgtctggccc
tctctctcttgcagatgggggccacagcttgagcaagcaggttctaagactcaacgtctc
tatctctcggaacaaacgaatggcagtgtgcctaatactttggtcatagccaattgcgaa
actgttaataggcagcttaatgaaaaggcacactctccatttgtgaagaagtacaagacc
atcatccaccctggagaggtcaacagaattagggaactccctcaaaatagcaagattgta
gctactcacaccgacagtcctgatattctcatttggaacactgagactcaaccagaccgg
tatgctgtgcttggagctccagattctcgtccagatttgttactaattgggcaccaggat
gatgctgaatttgctcttgcaatgtgcccaaccgaaccttttgttctctctggaggcaag
gacaagtccgttattttgtggaatatccaagaccatatcacaatggctggttcggattcc
aaatcccctggatccagcttcaagcagactggtgaaggtagtgataaaactggtggtcct
tctgttggccctcgaggcatatataatggccacaaagatactgttgaagacgtggcattc
tgtccatctagtgcacaagaattctgcagtgttggtgacgattcttgccttatgctatgg
gacgcaagaactggcactagtcctgccatgaaggttgagaaggcacatgatgctgatctt
cactgtgtcgattggaatcctcatgacaataatctgatcctgactgggtcagcagataac
actgtccgtgtgtttgaccgccgaaaccttacctcaaatggagttggttcacctgtttac
aaatttgaaggccacagagctgctgttctttgtgttcagtggtctcctgataaatcatct
gtttttgggagttctgcagaagatggtctcttgaacatatgggattgtgatagggttggc
aagaagtctgagcgtgcaaccaaaactcctgatgggcttttcttccagcatgctggtcac
agggacaaagtggtcgacttccactggagcctattgaacccttggactattgtcagtgtt
tctgataattgtgagagtatcggtggaggtggtacattgcagatatggcggatgagtgac
ttgatttacagaccggaagatgaagtcctgacagagctagagaaattcaagtcacatgtt
ttcacatgtacctccaagtcttga
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