Arabidopsis thaliana (thale cress): AT4G29950
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Entry
AT4G29950 CDS
T00041
Name
(RefSeq) Ypt/Rab-GAP domain of gyp1p superfamily protein
KO
K18469
TBC1 domain family member 5
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G29950
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
AT4G29950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
829118
NCBI-ProteinID:
NP_001329144
TAIR:
AT4G29950
UniProt:
A0A1P8B6U2
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All DBs
Position
4:14656954..14660573
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AA seq
820 aa
AA seq
DB search
MLCCQSFLIWETLRDLSYLGLARDLIGSSNSINVLVLQCFCLCRYAALRRRLLIDPHLSK
DVRNSPDLSIDNPLSQNPDSTWGRFFRNAELEKTLDQDLSRLYPEHWSYFQAPGCQGMLR
RILLLWCLKHPEYGYRQGMHELLAPLLYVLHVDVDRLSEVRKSYEDHFIDRFDGLSFEER
DITYNFEFKKFLEDFTDDEIGGIQGNSKKIKSLDELDPEIQSIVRLSDAYGAEGELGIVL
SEKFMEHDAYCMFDALMNGVHGCVAMAGFFAYSPASGSHTGLPPVLEASTAFYHLLSFVD
SSLHSHLVELGVEPQYFGLRWLRVLFGREFLLQDLLIVWDEIFSADNTTRTDADNNTNQS
YKIFDSPRGALISGMAVSMILCLRSSLLATENAASCLQRLLNFPEKIDVRKIIEKAKSLQ
TLALDDDVRSSALSINDGFDQSISPAVPARTNSFPSGSTSPKSPLIITPQSYWEDQWRVL
HKAAEEEKKSPSPIQKKKPWFRVKRLFRAESEPTHSAKSPNGKSEVKISSVARNLLEDFN
RQLVSEPVEANPIDVVNNEDSSIRETEDINTDFETAAEESIVMEENSSDLFSDPNSPLRD
SNYIENDSDSSNESNLFPDETVKDRETSVVDSPLSISSQPSMEFIVSLSKDQETSVVDSP
LPVSSQPSIEFPVTQSNDEDNAADKSVANIKERSKVLPGKFQWFWKFGRNVTAEETRCNG
VESSKSDLVCSSESHSLPQASSSGSKGDTDQNVMNTLKNLGNSMLEHIQVIESVFQQERG
QVQAGLIENLSKNNLVEKGQVTAMTALKELRKISNLLLEM
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgttgccaaagtttcctaatttgggaaactttaagagatttgagctatctgggt
ttagcaagagatctaattggctcctccaatagcataaatgttttggttttacaatgtttc
tgtctatgtagatatgctgctttaagaagacggctcttgattgatccacatttgtctaaa
gatgttcgaaattcccctgatctctctatcgacaatcccttatcacaaaaccctgatagt
acatggggtcggttcttccgtaacgcagagctagagaaaacattggatcaagacttgtct
aggttatatccagagcattggagttactttcaagctcctggatgtcaaggcatgttaagg
cgtattctactcttgtggtgccttaaacatcccgagtacggttatcgacaagggatgcat
gagcttttggcgccactgctttatgtacttcatgttgatgttgatcgtctctctgaagtg
cgtaaaagttatgaagatcatttcatagacagattcgatggtttatcttttgaagaaaga
gatattacttacaactttgaattcaaaaagtttctggaggatttcacggatgatgagatt
ggtggtattcaggggaattcaaagaaaataaagagtctagatgagctcgatcccgaaatc
cagtctattgtgaggttaagtgatgcttatggagctgaaggtgaactcgggattgtcttg
tccgagaaattcatggagcatgatgcttactgcatgtttgatgctctaatgaatggagtt
catggttgtgttgcaatggctggattttttgcttactctccagctagcggatcccacacg
ggtttacctcccgttcttgaagcttccactgcgttttaccatcttttatcattcgttgat
tcgtctctccatagtcatttagtagaactcggagttgaacctcagtactttgggcttcgc
tggttacgagttttgtttggaagagagtttttgcttcaggatttattgatagtgtgggat
gagatattctcagcagataacacgacgagaacagatgcggataacaatacaaaccagagc
tacaagatctttgattctcctcggggagctctaatctcgggaatggcagtttcgatgata
ttatgtttaagatcatcattgcttgctactgaaaacgcagcttcttgtctccagagacta
ttgaatttcccagagaagattgatgtgaggaagataatagagaaagctaagtcattacaa
actttggctttggatgatgatgtacgatcatcagctctatcgataaatgatggctttgat
cagagcatcagtccagcagtaccggcgagaactaacagttttccttccggatccacatct
cctaaatctccattgataattaccccacaaagttattgggaggatcaatggagagttcta
cacaaagccgccgaggaagagaaaaagagtccttctccaatacagaagaaaaagccttgg
ttcagggtgaaaagacttttcagagcagagtctgagccaactcatagcgccaagtcacca
aatgggaaaagtgaagtcaagatatcatcagttgcgcgaaacttgcttgaagattttaat
cggcagcttgtttctgaacctgtggaagctaatccaatagatgttgtgaacaatgaagat
agctcaattcgagaaaccgaggatataaacacggattttgaaactgctgctgaagagagt
atagtaatggaggagaattcttctgatcttttctcagatccaaacagtcctctcagagac
tcaaactacattgagaatgattcggatagcagtaacgagtcaaatctatttcctgatgaa
acagttaaagatcgagaaacaagcgtagtagattcgcctctttccatttcttctcaaccg
agcatggagtttatagtatctctgtctaaagatcaagaaacaagcgtagtagattctcct
cttcccgtttcttctcaaccgagcatcgagtttccagtaactcagtctaatgatgaagac
aacgctgcagataaatctgtggccaatatcaaggagcgtagtaaggttttaccaggaaaa
ttccagtggttttggaagtttggacgcaatgtcactgctgaggagacgagatgtaatgga
gtcgaaagtagtaagagcgatttagtttgctcttctgagtcacattctcttccacaggct
tcatcttcgggcagcaaaggagacacagaccagaatgtgatgaatactctgaaaaacctt
ggcaattcgatgctcgaacacattcaggtgatagagtcagttttccagcaagaacgaggt
caggttcaggcaggactaattgagaatttatctaagaacaatttggtcgaaaagggacaa
gtcacagccatgactgctctgaaggagcttcgaaaaattagtaatcttttgttggaaatg
tga
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