Arabidopsis thaliana (thale cress): AT4G30100
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Entry
AT4G30100 CDS
T00041
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT4G30100
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AT4G30100
5.6.2.5 RNA 5'-3' helicase
AT4G30100
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AT4G30100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
UvrD_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
829133
NCBI-ProteinID:
NP_001320087
TAIR:
AT4G30100
UniProt:
A0A654FU78
Q9SZW3
LinkDB
All DBs
Position
4:14713400..14720061
Genome browser
AA seq
1311 aa
AA seq
DB search
MASEGKLLFDLNELPTEDDDGIDNVNFNQQPQVTIPSSNPSSSALLATPSSSQDNVNNNR
VFSHASTVSGFQPFVRPVAAQHTDVAVERKVDEGSLEEAKVTSLKVPNDVGAPEREEGEW
TESEVPANDNVHSSSDYSTVTEKDNGTLGLDINSDSALQKKNVNHISESSGKDSGSIDSP
QEQGLTVRPRETKGVEASHAIKCANTTVKRKMDHQKETMLGKKRHRQTMFLNLDDVRQAG
PIKTTTPRRQNFPQPVVTRTVRESRAGPPTAEQAGGVPGHVVYRDQKPIDIPNGGIHPET
SEPKLESNGESQSGSAGKTRRMNGEAGPSAEATSTSVSRQGSWKQPINSRQLKSGHSSNR
QVPLCSQTSADSKFGNKKFTSFKKQATNSTQYQDTSVERLLREVTNEKFWHHPEDTDLQS
VPERFESMDEYVRVFEPLLFEECRAQLYSTWEELAEANSYMKVRIKFIERRERGWYDVIL
NSVNECKWAFKEGDVAVLSNPVPESEGEHDDVGRVAGTVRRYIPVDTRDPHGAILHFYVG
DAYDSGSKIDDNHILRKLKPKEIWHLTVLGSIATTQREYVALHAFSQLNPQMQNAILKPS
PEQFPNYGEQTPTVPDCFTPSFAGHLHRSFNAPQLAAIHWAAMHTAAGTSSGVKRQDPWP
FTLVQGPPGTGKTHTVWGMLNVIHLVQYQQYYTSLLKKLAPESYKQVNESSSDNIVSGSI
DEVLQNMDQNLFRTLPKLCAKPRMLVCAPSNAATDELLSRVLDRGFIDGEMRVYRPDVAR
VGVDTQTKAAQAVSVERRSDLLLAKSREEILGHIHNLRVRDAQLSQDIAGLKRELTAAAF
ANRSQGSVGVDPDVLMVRDQTRDAMLQRLSAVVEARDKDLVEMSRLLIVEGKFRAGTSFN
LEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL
GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFP
SRYFYQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFC
VGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQG
QERDVIIMSCVRASNHGVGFVADIRRMNVALTRAKRALWVMGNASALMKCEDWAALITDA
KARNCFMEMESLPKDFPVPKVPSFIPKAPNARGFRSGGPRTRSIDMHPESRSGTPSEDDK
KLSTTTFPRNGNSRRENSVDDSDPPGDRYRDAWQHGIQRRQNFGRPLGRRD
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaaggaaaattgttatttgatcttaatgaacttcctacagaagatgatgat
ggcattgataatgttaacttcaatcagcagccacaggtgactatcccatcttctaacccc
agttcctctgccttgcttgctacaccgtcgtcttctcaagataatgtaaacaacaaccga
gtgttctctcacgcgtcaacagtttctggttttcagccttttgttcgccctgtagctgct
caacatacggatgttgcagttgaaagaaaggtggacgagggttctcttgaggaagcaaag
gttacatcattgaaagttccaaatgatgttggagcacctgagagagaagaaggggaatgg
acggagtcggaggttcctgccaatgataatgtacatagtagttctgattattctacagtt
acagagaaagataatggcactctaggattagatatcaactcagactcggctcttcagaag
aaaaacgtcaatcatatttcagaaagtagtggtaaagatagtggatctatagatagtcct
caagaacagggtttaacggtgaggccgagagaaactaaaggagttgaagcaagtcatgca
atcaaatgcgcaaatactactgtcaaaagaaagatggatcatcagaaagagacaatgttg
ggaaagaaacgccacaggcagaccatgtttctcaacctggacgatgtcaggcaagctggt
cctattaagacaacaacacctagaagacagaatttcccacaacctgtcgtcacacgcaca
gttagagaatctcgtgcaggccctccaactgctgagcaagcaggcggggttccagggcat
gttgtataccgggatcagaaaccaattgacattcctaatggtggtatacatccagaaaca
tctgaacctaagttagaatctaatggtgaatcacaatccggctccgctggtaaaactagg
aggatgaatggggaggcaggaccttctgctgaggcgacatcgacatctgtgtcaaggcag
ggttcatggaagcagccaataaattcacggcagctgaagagtggtcattcgtcaaataga
caagttcccttgtgcagtcaaacctctgccgactccaagtttggtaacaagaaatttact
tcgttcaagaagcaagcaacaaatagtacccaataccaagatacgtctgtggagcgtctt
ctacgagaagtgaccaacgaaaagttctggcatcatccagaggatactgatctccagagt
gttcctgagcggtttgaatcaatggatgagtatgttagagtgtttgaacctttacttttc
gaggagtgtcgggcacaactttacagtacatgggaagaattggctgaggcaaactcatac
atgaaggtcagaataaagttcatcgaaagaagagagagaggatggtatgatgtgatactt
aactcagtaaatgaatgtaaatgggctttcaaggagggagatgttgctgttctatcaaat
cctgtgcctgaatcagaaggagagcatgatgatgttgggcgtgtagctggtacagttagg
agatatataccggttgatactcgagatcctcatggagcaattctccatttctatgttgga
gatgcttatgactctggcagcaagattgacgacaatcatattttaaggaagcttaaaccc
aaggaaatctggcatctgactgtgcttggttcgattgcaaccacacaaagggaatatgtt
gctttgcatgcgttttcccagcttaacccacagatgcaaaatgcaattctcaagcctagc
ccagagcagtttcctaattacggggagcagactcctacagtgcccgattgtttcactccg
agctttgctggccatttacacagaagctttaatgctcctcagttggcagcaattcactgg
gccgcaatgcatactgcagctggtacgagcagtggggtaaagaggcaagatccatggcca
tttactcttgttcagggccctccaggaacaggcaagacacacacagtttggggaatgttg
aatgttatccatttggttcagtatcagcagtattacacttccttgctgaagaaattagct
cctgaaagttataaacaagttaatgagagcagttcagataatattgtgtcagggtctatt
gatgaagtcctacaaaacatggaccagaatctatttcgtacgctgccaaaactgtgtgct
aaaccaaggatgctcgtttgtgctccttcaaatgctgcgaccgacgaacttctctcacgt
gtccttgatcgtggttttattgatggggaaatgagggtttatcgccctgatgtagctcga
gtaggtgttgatacccaaacgaaagctgctcaagcagtttctgtggagcgaagaagtgat
ctgctactagccaagtcccgtgaggaaattctaggacacatacacaaccttagagtacga
gatgctcagctatctcaagatattgctggacttaaaagggaacttactgctgcagcgttt
gctaaccgttctcagggatctgttggcgttgaccctgatgttcttatggttagagaccag
acaagagatgcaatgttacagcgtctttctgctgttgttgaagccagagataaagatctt
gttgaaatgtctcgccttcttattgttgagggaaagtttcgagctggtacttcttttaat
cttgaagaagctcgcgcaagtcttgaggcaagttttgcaaatgaggctgaaattgttttt
acaaccgtatcaagcagtggccgtaaactgttttctcgtcttactcatggcttcgatatg
gtggtcatcgacgaggctgcccaagcttctgaggttggagttcttcctccccttgcgctt
ggtgctgcgcgatgtgtacttgtcggtgatcctcagcagcttcctgctacagttattagc
aaagctgctggaacccttttatacagtagaagtctctttgaaaggtttcagctagcaggt
tgtccaactttgttgttaactgttcaatataggatgcatcctcaaatacgcgacttccct
tcaagatatttctaccaaggacgccttacggacagtgaaagtgtttccactgctcctgat
gagatttactacaaagattctgtccttaagccttaccttttctttgatatcagccatgga
cgggaatcccatcgaggtggatcagtatcttatgagaacattgatgaagctcgcttctgt
gttggggtgtacttacatctacagagaactctgaagtctttgggtgggggtaaagtctct
gttggggtaattaccccatacaaactgcagttgaaatgcctgaaaattgagtttggaaat
gctttgagccaagatgaactgcaagagatttatatcaatactgtagacgcgtttcagggt
caagaacgtgatgtcataatcatgtcatgtgtgcgtgcttctaatcacggggttggcttc
gttgctgatatccggcggatgaatgttgctctcacccgtgcgaaaagggctttatgggtg
atgggaaatgcatctgctctgatgaagtgcgaggattgggcagcattgatcactgacgcc
aaagcaaggaattgttttatggagatggagtctcttcccaaggatttcccggttccaaag
gtacctagctttatcccaaaagcacctaatgctagaggtttcagatcaggtgggccaaga
accagatccatcgatatgcaccctgaatccaggtcagggacaccatcagaagacgacaag
aagctgagcacaacaacatttccaagaaatggaaattctcgaagggagaactcagttgat
gattctgacccgcccggggatagatatagagatgcttggcaacatgggatccaaaggagg
caaaattttggacggcctttagggagaagagattaa
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integrated database retrieval system
