Arabidopsis thaliana (thale cress): AT4G30220
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Entry
AT4G30220 CDS
T00041
Symbol
RUXF
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT4G30220 (RUXF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT4G30220 (RUXF)
03041 Spliceosome [BR:
ath03041
]
AT4G30220 (RUXF)
03032 DNA replication proteins [BR:
ath03032
]
AT4G30220 (RUXF)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
AT4G30220 (RUXF)
Spliceosome [BR:
ath03041
]
Complex A
U1 snRNP components
Sm proteins
AT4G30220 (RUXF)
U2 snRNP components
AT4G30220 (RUXF)
Complex B
U1 snRNP components
AT4G30220 (RUXF)
U4/U6.U5 tri-snRNP components
AT4G30220 (RUXF)
Complex C
U2 snRNP components
AT4G30220 (RUXF)
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
AT4G30220 (RUXF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF7688
Motif
Other DBs
NCBI-GeneID:
829145
NCBI-ProteinID:
NP_194751
TAIR:
AT4G30220
UniProt:
Q9SUM2
A0A654FU79
Q0WT08
LinkDB
All DBs
Position
4:complement(14802931..14804461)
Genome browser
AA seq
88 aa
AA seq
DB search
MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL
GEILIRCNNVLYVRGVPEDEELEDADQD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgactattccggttaacccgaaaccattcttgaacaacttgaccggcaagactgtt
atcgtcaagcttaaatggggaatggaatacaaaggttttctcgcctctgttgactcctac
atgaacttgcagctgggaaacaccgaagaatatattgatggacaattgacagggaacctt
ggagagatcttgatcaggtgcaacaatgttttgtatgtccgtggtgtgccagaagatgaa
gagcttgaagacgctgatcaagactaa
DBGET
integrated database retrieval system
