Arabidopsis thaliana (thale cress): AT4G30790
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Entry
AT4G30790 CDS
T00041
Name
(RefSeq) autophagy-like protein
KO
K08330
autophagy-related protein 11
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
AT4G30790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT4G30790
03029 Mitochondrial biogenesis [BR:
ath03029
]
AT4G30790
Membrane trafficking [BR:
ath04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
AT4G30790
Mitophagy
Scaffold proteins
AT4G30790
Mitochondrial biogenesis [BR:
ath03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
AT4G30790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
829202
NCBI-ProteinID:
NP_194808
TAIR:
AT4G30790
UniProt:
Q9SUG7
A0A5S9XZK9
LinkDB
All DBs
Position
4:complement(14992396..14998649)
Genome browser
AA seq
1148 aa
AA seq
DB search
MSGSFTESFADDGKLLLCVAENGHSFEFQCSETTSVESVMRFVESVSGIALSDQLLLSLD
MKLEPQKLLSAFGLPASDREVFVFNKAMLQSNSHPPSPEDVDLQDVADALPPASLHEHHP
LDDASDPALKALPLYERQFRYHFHKGRTIYNCTVVKHENCERLTREQKVQQRAVEVATRN
LEQYYRVIYQNFLEFMKRYKHQHRLHSDLLMNFGRDIEKLRSAKIHPYLQTESRKCLLDF
VKEDNLKKAVENCASSHRQFENKIAQFQQMFVEVKRKVEELFACRASLSMKNLEVTVKDH
ERFIDEEKSIMQSLSKDVNTVKKLVDDCMSSQVSSSLRPHDAVSALGPMYEVHDKNHLPK
MQACYNSISELLDFCKNKKNEMNNFVHGYMQKITYVTYIIKDAKLQFPVFREAMVRQDDL
FADLKLVRGVGPAYRACLAEVVRRKASMKLYMGMAGQLAEKLAMKRETEVRKREEFLKTH
GPFVPRDVLASMGLYDTPTQCDVNVAPYDTSLLNIEISDVDRYAPEFLVGLHSKIASLKS
SLTMSGDSSLSAEPEEIGIDTFDKDNFDDILAASELIEIAGTSKMEVENAKLKADLASAI
SRICSLGPQFEYEVLDESEVENVLKNAADKTAEALQAKDEYEKHLLLMLKEKQMHCDSYE
KRIRELEQRLSDEYLQGQRHNNKDVSGLNLMHEKVSEYKAEASSDVEGNKTHVSGSEPMD
EVSCVSNLTSKQPCKAREGMDENMVDSSQVLSQPLDSSMLESQQNNEKGGKDSEAGEMGV
FLSNSSTAESPQKSLDDNVATGRGLDAKDSGDIILELRNELMEKSNKLSEMESKLNGAME
EVSNLSRELETNQKLLEESQMNCAHLENCLHEAREEAQTHLCAADRRASQYTALRASAVK
MRGLFERFRSSVCAGSGIADFADSLRTLAQALANSVNENEDDGTTEFRKCIRVLADKVSF
LSKHREELLEKCQNLEATSEQTRKDLEEKKELVKTLYTKHQLGKQANKEKISFGRLEVHE
IAAFVLNQAGHYEAINRNCPNYYLSSESEALFTDHLPSRPTYIVGQIVHIERQIVKLPSQ
LSASASPEAGKTHHLCSDQGSRTLASSSISTSTSATTTSNPYGLSSGCEYFIVTIAMLPD
TAIHQQAS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaagcttcactgagagtttcgccgatgatggcaagcttcttctttgtgtggct
gagaatggccactcgtttgaatttcaatgcagcgagactacttcagttgaatctgtgatg
cgtttcgttgaatctgtttctggtattgccttatctgatcagcttcttctctcgctagac
atgaagcttgagccacaaaagctgctttctgcttttggacttcctgcaagtgacagggaa
gtgtttgttttcaacaaggctatgctgcaaagtaactctcatccgccatcaccagaagat
gtagatttgcaagacgttgctgatgctttaccaccggcttcattacatgaacatcatccc
ttggatgatgcatcggatccagctttaaaggctttacctttgtatgaaaggcaatttcgt
taccatttccataaaggccgcaccatctacaattgtacggttgtgaagcatgagaactgc
gaaaggttaacgagagagcaaaaggtacagcagcgggctgttgaagttgctactaggaat
ctggaacagtattacagggtgatctatcagaactttcttgaatttatgaagcgttataag
catcaacaccgcctccactctgatttgctgatgaattttggaagggatattgagaaattg
aggtcagccaagattcacccttatcttcaaactgagtcaaggaaatgcttgttggacttt
gtcaaggaagataacctcaaaaaggctgtggagaattgtgcaagctctcacaggcaattt
gagaataagattgcacagttccagcagatgtttgtcgaggtcaagcgcaaggtagaagag
ttgtttgcctgcagggcttctttatcaatgaagaacttagaagtgactgttaaggatcat
gaacgcttcattgatgaggaaaagagcattatgcagtctctcagcaaagatgtcaatacg
gttaagaaacttgtggatgattgtatgtctagccaagtgtcctcatctctgcgtccccat
gatgctgtttcagccctgggtcctatgtacgaagtgcatgacaagaatcaccttcccaaa
atgcaagcttgctataactcaatttcagaattactggatttctgcaagaacaagaagaat
gagatgaacaactttgtacacggttacatgcaaaagataacatacgtcacatatatcatc
aaagatgctaagttacagtttcccgtttttagagaggcaatggttcgccaggatgactta
tttgcagacttgaagttagtccgtggtgttggccccgcttatagggcctgtcttgcagag
gtggtgagaagaaaagcctctatgaagctttacatgggcatggctgggcaattggcagag
aagcttgctatgaagagggaaacagaggtcaggaaacgtgaggagtttcttaaaacccat
ggcccctttgtacctcgtgacgtgttggcttcaatgggtttatacgatactcctactcag
tgtgatgtcaatgttgctccgtatgatactagtttgctcaatattgaaatctcagatgtt
gatcgatatgctcctgagtttctagttgggttacattcgaagattgcatccttaaagagt
tcactgaccatgtctggtgatagctcgctttccgctgagcctgaggagataggtatagac
acttttgacaaagacaattttgatgatatcctagcagcctctgaattaatagagatagct
ggaaccagcaagatggaagttgagaatgcaaaactaaaagctgaccttgcttctgcaatc
tctcggatctgttcattaggcccacaatttgaatatgaggtactggatgaaagtgaagta
gaaaatgtgttgaaaaatgctgcagataaaacagcagaggcattgcaggccaaagatgag
tatgagaaacatcttctacttatgctcaaggaaaaacaaatgcactgtgattcatatgag
aagcgcatccgtgaactggaacaacgtctctctgatgagtatctacagggacagagacat
aataataaggatgtatctggcttaaaccttatgcatgaaaaagttagtgaatacaaagca
gaagcttcaagtgacgtggaaggcaacaaaactcatgtatctggttcagaaccaatggat
gaggtctcttgtgtttcaaatcttactagcaagcagccatgtaaagctcgggaaggtatg
gatgagaatatggtggattcctctcaggtgctcagtcaaccgcttgactcatcgatgctg
gaaagccagcaaaacaacgagaaaggtggaaaagatagtgaggctggggaaatgggtgtg
tttctaagtaacagttcgacagctgagagcccacaaaaatctttggatgataatgtggca
actggcagaggtttagatgccaaagacagtggtgatattatcttggaacttagaaatgag
ctgatggaaaagtccaataaactgagtgaaatggagtccaagctaaatggtgctatggaa
gaggtatccaatttgagcagagagttggaaacgaatcagaagcttctcgaagaatcccag
atgaattgtgcgcatttggagaactgcttacatgaagcaagagaagaagcccagacccat
ctttgtgctgctgatcgtagagcttctcagtatactgcacttcgtgcatcagctgtgaag
atgcgaggtctctttgaaagattccggagctctgtctgtgctggtagtgggattgctgat
tttgctgactccttgcgaactttggctcaagctttagccaactccgttaatgaaaatgaa
gatgatggtactactgagttccggaaatgcatccgagtcctggcagacaaagttagcttc
ctctccaaacaccgggaggaattattggagaagtgccaaaatcttgaagccacaagtgaa
cagacaagaaaggatttggaggaaaagaaagagctggtgaaaacattgtacactaaacac
caacttgggaagcaggcaaataaggaaaagatatcattcggtcgtcttgaagtccatgag
atagcagcatttgtgctaaaccaagcagggcattacgaggcaatcaacaggaactgccca
aattactacttgtcctctgaatctgaggcattgttcacagatcatctcccaagccggcct
acatacattgttggacagattgtccacatagagcgccaaatagtgaaactgccatcacaa
ctttcagcttctgcttctcctgaggcgggtaagacacatcatctctgctcagaccagggc
tcgagaactctggcatcaagttcaatctcaacatcaacttcagcaacaacaacatcaaac
ccttatggtctctcttcaggatgtgaatacttcatagtgacaatagcaatgcttcctgac
actgctattcatcaacaagcttcctga
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integrated database retrieval system
