Arabidopsis thaliana (thale cress): AT4G30990
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Entry
AT4G30990 CDS
T00041
Name
(RefSeq) ARM repeat superfamily protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT4G30990
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
AT4G30990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
HhH-GPD
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-GeneID:
829224
NCBI-ProteinID:
NP_001320096
TAIR:
AT4G30990
UniProt:
F4JR52
LinkDB
All DBs
Position
4:15084098..15097986
Genome browser
AA seq
2619 aa
AA seq
DB search
MATSADARAVKSLNTSEGRKRFVFKSASQRTNDIDNISNYRNLDKVKAEPSEGSTFFRDC
LIEWRELNTAEDFILFYEEMLPSVQSLSLIIMQKERIFSNLVSRLQMKARLSLEPILRLI
AALSRDLLNDFIPFLPQIVNSFVTLLNNGAHNDPEIIQQVFTSWASIIVSLQKYLVCDIE
GILRDTLELRYYPKDNISEFMSESMSFLLRKAQDEQLEKGMKMILSEVAHPSKKAGGVGV
LYNVMRGTYGRLHSKAGRVLSFLLKDSTLSFLDNFPQGPCTVVEVVSLVLQRICEDLEAE
KLSAMWEYLYKKINKSISNKKSVHLSRLLSVLMAVVKIKEGRKVHDIPSLIGIVSRIVST
FFTSSETAVEGDNLSAVLDEVLELILCTINTVNEMETVASLWAPIFALKSSSLLTFLREF
LKKDQSVVKAFTKNILCAINNMIWESSEEVIPLLLTLCEEHKTQQTSHDVVNSISQTFES
RYERIHEFLEAKIKKVQQNIENAGLAQINEAELAAIWGVVKCYPYFKVDSSLLICFKKTL
RQHLAVSDDTCSGPELMWQSLLGTTLRSCYKMTGINHSDLEEALSFAKDYKSCEQVLSPV
ADVLEFMHRPALAHGRSKPYPELQANKAGDAFEIFSENLRHPNKNIRLMTLRILCHFETL
SSDPSFEEHPPKKKMKTEKNVLQLLLLFEETAPTVDTSRMLAGYISTIQDNLSAGRIHSA
YVKLVLNGMLGILHISYRPLCVQASECLAVLVRKYTGAVWSDFVCYLGQCQLKFETLHDH
SENANQSMSERHACNLNLNGRFNLFLFPPSAITPTATVSDVVSQLLQTLQKASSVAQSRA
SEILPLLLKFLGYNSENPGSVGSYNGRVCKGEDWKTVLVQWLTLLKLMKNPRSFCFSQFL
NDILQNRFLDDNDAEIQTNVLECLLLANDFLLPHRQHLLNLIKPKELREELTTWNLSENI
GEPHRSYIFSLVIRILMPKVRTLKNSASRKHTSIRHRKAVLCFISQLDVNELALFFALLI
KPLNIISEETMDSFWSSGKSSLDYFQNSNFLKYFTVDTISTLSRNQKFGFLHVIQHILEV
FDELRVRPFLDFMMGCVVRLLVNYAPNVDEEMNIDSLALRNVTAAPSTSDDKENASINHD
QAGTAFKQFKELRSLCLKIIAHVLDKYEDCDLGSEFWDLFFSAVSPLIKSFKQEGSSSEK
PSSLFSCFLSMSKSRNLVNLLCREESLVPDIFSILTVTTASEAIKSSALKFIENLLCLDN
VLGEDENMIRGFVDPYIEALINSLHSLFIGDILKRKSVKYHGEREIKILKLLSKRMQDRS
HVMKYLDVLLSFLNKSVKDPDIRREALLAIQDIIAYLGMESTSKIINTVSPLLVDAELDV
RLCICDLLESLAKIDFSLDDVAKRVRDMNAISAMEVDDLDYEKIVNAYVEINADFFIKSS
EQHTMIILSQSSILCREAPAHSEFGKEVKNADVSWTGDRVLCILRNFILKHIGDAINRGG
IIIKEWILLIREMVTKLPDAANLSAFRPLCSEDENVDFFKAIVHIQAHRRARAISRFSSV
VKDSSLPEGVVRKLLVSVFFNMLLEGQDGKDNNVRNACTEALASISAHMSWTSYYALLNR
CFREMNKHTKKGKILLRLICLILDKFHFAKDGYPHEAEEIRTCLQKIVFPRMQKLMNSDS
DNVNVNSSVAALKVLKLLPEDVLDSNLSSIVHKIASFLKNRLESTRDEARLALVACLKEL
GLEYLQVVVNILRAILKRGSEVHVLGYTLNSILSKCLSNPTCGKLDHCLVDLLAVVETDI
LGEVAEQKEVEKFASKMKETRKRKSFETLKLIAENVTFRSHGLKLLSPVTAQLQRHLTPK
IKTNLEKMLKQIAAGIEGNTSVDQGDLFLFIYGLVDDGINNRSGLGDQVSLPPSKKKKKS
RDLKETSGLCFGPKSCPHLITVFALDLFYNRMKKLRLDNTDEELLSKCFTSLVKFPLPSL
TSEADELKTALLTIAQSAVSSSSPLVQSCLKLLTTLLKNINITLSSEQLKMLIQFPIFID
LESDSSFVTLSLLKAIMNRKLVVPEIYDIAIQVSKLMVNSQLESIRKKCKHILLQFMVHY
TLSEKRLEQHVNFLLENLRYEFPTGREAVLDMLHALILKFSEPNLGKQSVLDQQSQKLFI
QLTVCLSNETDRKVLPLVGAVIEVLIGRMSKDQVDSSLLYCLCWYKQQNLSAAAAQVLGF
FISAMKKTFRKHIYNTVEDARTILESAISASSLQLQDTVEEASLPFWKEAYYSLVMIEKM
LEQFPDLRFGKDLERSPARKITALALSASITTLDLDIWKMVFKFLLHPHAWLRNKSCRLL
NLYFEALAGRKRPECRTLVADSLLEKPSSLFMVAVSLCFQLKEQPTTGNIDVDLLTANIV
FAVSSLHSLIGQFDQATHNRFWSSLGEDEQVVFLKAFEVLDAGKGRSTFLALTSGKRTEN
GDDDVRNVMIGSLLKRMGKIALDMESVQMRVMFNVYKSFASQLNQEECRLYAYKILLPLY
KVCEGYTGKIVTDELKQLAEEVRDSIRDKSLGNKMFVEVYSEIRNSLRTKRDKRKREEKL
MAVVNPERNAKRKLRLASKNKANKKRRMTSMKLSRWACS
NT seq
7860 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcagctgatgctcgggcagtaaagtcgctcaacacttccgaggggcgtaag
agatttgtgttcaagtctgcttctcaacgaacaaatgacattgacaacatcagcaactat
aggaacttggataaggtgaaggctgagccttcagaaggatccacatttttcagggattgc
ctcatagaatggagggaactgaataccgcagaagatttcattttgttttatgaagagatg
ttgccatctgtccagagtttgagtttgattattatgcaaaaagaaagaatcttctcaaat
cttgtctctcgattacaaatgaaagcaagattgtctctggaacccattctcaggttgatt
gctgctctatcaagagatctcttgaatgactttattcccttcttgccacaaattgtgaac
tccttcgtgactctcctaaataatggtgcgcataacgatccggagattattcagcaggta
ttcacatcatgggcttccataatagtgtccctgcagaagtatcttgtgtgcgacatcgaa
ggcattctcagggatacgttggaattgaggtactaccccaaagacaatatcagtgaattt
atgtcagagtccatgtcatttttgttgaggaaagcacaggatgagcaacttgaaaaaggt
atgaagatgatcctttctgaagttgcacatccatccaaaaaagctggaggagttggagta
ctatataatgttatgaggggtacctatggaagactccattcaaaagccgggagagttttg
agcttcttgctgaaagattcaacattatcttttttggacaattttcctcaaggcccttgt
acagtcgtggaagttgtgagtttggttttgcagagaatatgcgaggatttggaagcagaa
aaattaagtgctatgtgggaatacttgtataagaaaataaacaaatcaatctcaaacaag
aaatcagttcatctaagccggctgttgagtgtgcttatggcggttgttaagattaaggaa
ggtcgcaaggttcacgatatcccatcactgattggaatcgtgagccgcattgtgtcaact
tttttcacttcctctgagaccgctgtagaaggggataacttatctgctgtccttgatgaa
gttttggaattgatattatgcacaatcaacacggtcaatgaaatggaaactgttgcttcg
ctttgggctcccatttttgccttgaagagttcaagtttgctgacttttttgcgggagttc
ctaaagaaagatcaatcagtagtgaaagcctttacaaagaatatattatgtgcaattaac
aacatgatttgggagtcttctgaggaagttattcctctgttactaacattgtgtgaagag
cataagacacaacaaacaagtcacgacgtcgtgaacagcataagtcaaacatttgagagt
agatacgagagaattcatgagttcttggaagcaaagattaaaaaggttcaacagaatatt
gagaatgctggattagctcaaattaatgaggccgagttggctgcaatttggggagttgtc
aagtgttatccttattttaaagtggattcatcattattgatttgctttaagaaaactctc
agacagcatttggcagtgtcagatgacacttgcagtggcccagaattgatgtggcagagc
ttacttggtactactttgaggtcatgttacaaaatgacgggaatcaaccacagtgatcta
gaggaagctttgtcttttgctaaagattacaagtcatgtgagcaagtgttgtccccggtg
gccgatgttttggaatttatgcacaggcctgcattagctcatggtaggtctaagccttat
ccagaacttcaagcaaataaggctggagatgcttttgaaatattttctgaaaatttgcgt
catccgaacaaaaatatccgtcttatgactctgaggattttgtgccattttgaaactttg
tcgtctgacccttcttttgaagagcatcctcctaagaagaaaatgaaaactgagaagaat
gttcttcagttattactcttattcgaagagactgctcccacagtggatactagtcggatg
ttggcaggatacatttctacaatacaagataacctctccgctggcaggatacattcggca
tatgtgaagcttgtattgaatgggatgttggggatattacatattagttatcgtcctttg
tgtgttcaagcatctgagtgtcttgcggttcttgtgaggaaatatactggtgcagtgtgg
agtgattttgtttgttatttggggcagtgccaactaaaatttgaaaccctccatgatcat
agtgagaatgcgaaccaaagtatgtcagagaggcatgcatgtaatttaaatctgaatggc
cgttttaatttgtttctctttccaccatctgctatcacgcctactgcaacggtatctgat
gtggtatctcagttgctacagaccttacaaaaagcttcaagtgttgctcagtctcgggct
tctgaaattctccctttgttgttaaaatttctgggatacaacagcgaaaatcctgggagt
gtcggatcatataatggccgagtttgtaaaggagaggactggaagacggttcttgtacaa
tggttgacgttgctaaaattaatgaagaatcctaggtcgttttgttttagtcaattttta
aacgacattctgcagaataggttcctggatgataatgatgctgaaatccaaacgaatgtt
ctagagtgccttctgttggcgaatgacttcttactcccacaccgccagcatttgttgaat
ttgatcaaaccaaaagaattgagagaagaactcacaacctggaacttgtccgaaaacatc
ggagaacctcacagatcttatattttttctcttgtaattcgcatccttatgccaaaagtt
aggacattaaaaaattcggcttcaaggaagcatacaagtatccgtcaccggaaggcagtt
ctttgctttatatctcagctggatgttaatgaacttgcgttgttctttgcattgttgata
aaacctttgaacatcatatcagaggaaacaatggactcattttggagttcaggcaaaagt
tctctcgactatttccaaaactccaattttctgaaatatttcactgttgatactatttca
acgttatccagaaatcagaaatttgggtttcttcatgtcatccaacatatccttgaagtc
tttgatgaacttcgtgtccgaccttttctagactttatgatgggatgtgttgtccggcta
ttggtaaattatgctccaaatgttgatgaagaaatgaacattgattctttggcactaaga
aatgtcactgctgccccatcaacttcggatgataaagaaaatgcttcaataaatcacgac
caggctggcactgcttttaagcagtttaaagagttgagatccttatgtctgaaaatcatt
gctcatgttcttgataaatacgaggattgtgatcttggctccgagttctgggacctcttc
ttttcagctgtgagtccgttaattaagagtttcaagcaggagggttctagtagtgagaaa
ccaagttccttgttctcatgcttcttgtcaatgagtaaaagccgtaatctcgtgaatctc
ttatgtcgggaagagtcccttgttccagacattttttcaattctaactgtcaccacggct
tcagaagctataaagtcttctgccttgaagttcattgagaatctgctttgtcttgacaat
gtgttgggtgaggatgaaaatatgatccgtggattcgtagatccgtatatagaagcactg
attaacagcttgcattctcttttcattggggatattttgaaaaggaaatcagtcaagtat
catggggaaagagagattaaaattcttaaattattgtcaaagcgtatgcaagatcgctcc
catgttatgaagtatttggatgtcttgctgtctttcttgaataaaagtgttaaagatcct
gatatccgtcgtgaagctttgctagccattcaggacatcatagcgtatcttgggatggag
agtaccagcaagattataaatacagtctctcctctacttgttgatgctgaacttgatgtt
agattatgcatttgtgatcttcttgagtctcttgcaaaaatcgacttttcactggatgat
gtggcaaagcgtgtccgcgatatgaatgccatctcagctatggaagttgatgaccttgac
tatgaaaagatagttaatgcctatgtggagattaatgcagatttctttattaaatcctca
gagcagcatacgatgattatactctcacagtcctcaatactttgccgagaagctccagct
cactctgaatttggaaaagaggtcaaaaacgctgatgtaagctggacaggagatcgtgta
ctgtgcattttgagaaattttattttgaaacacattggagatgcaataaacagagggggc
attataataaaggaatggattcttttgatacgcgagatggtgaccaaacttccagatgcc
gcaaatctttctgcattcagacctctatgctctgaagacgagaatgtagatttttttaaa
gctattgttcacattcaggcacaccgtagagctagggcaatttcacgtttcagtagtgtg
gttaaagatagcagtctgcctgagggagtagtgagaaaacttttggtctcggtctttttc
aatatgttactcgaaggacaagatggaaaagataataatgtcagaaatgcatgcacagaa
gcccttgcatctatatctgctcatatgagttggacatcgtactatgctttactgaatcgg
tgtttccgagagatgaacaagcacaccaaaaaaggaaaaattctgctgcgacttatctgc
ttgattttggataaatttcattttgcaaaagatggctacccacatgaggctgaggaaatt
aggacttgccttcagaaaattgtgttcccgaggatgcagaagctgatgaattctgattct
gataatgttaatgttaacagtagtgtggctgcgcttaaggttctaaagctactccctgaa
gatgtattggactcaaacctatcatctatagttcacaaaattgccagttttttaaagaac
cggttggagagcacacgtgatgaagccagattggctctggttgcttgtttgaaagaactt
gggctggagtacttgcaagttgtagtcaacattttacgtgctatcttaaaacgaggatct
gaggtgcatgtgctggggtacactctcaattctatcttatcaaagtgcttgtccaatcct
acatgtgggaagttagatcattgtttggttgatctccttgctgtggtggaaaccgatatc
cttggagaggttgctgaacagaaagaggtggaaaaatttgcatccaaaatgaaagaaaca
agaaaacggaagtcatttgagactctgaaattgattgctgaaaatgtaacgttcagaagc
catggattaaagttactttctccggtcactgctcagctgcagcggcatctaactccaaag
atcaaaacaaatctggagaagatgttaaaacaaattgcagctggtattgaaggcaataca
tctgttgaccaaggagatctttttctttttatatatggcctagttgatgatggtattaat
aacaggagtggtcttggagatcaagtgtctttaccaccctccaaaaagaagaagaaatca
agagatctgaaagagacttctgggttgtgttttggtccgaagtcatgtccacatcttata
accgtgtttgctctggacttattttataaccgaatgaaaaaattgagactcgacaacact
gatgaagagctactgtcgaaatgttttacttcattagtaaagtttccactgccttccctc
acgtctgaagcagatgaactgaaaacagcattgttaaccattgctcagtctgcagttagt
tccagcagtcctcttgtgcagtcatgccttaagctgcttacaacgcttctcaaaaatata
aatataactttatcatctgagcagttgaaaatgttgattcagttccccatatttattgat
ctggagtctgattcatcctttgttactctttcacttctcaaggccatcatgaaccggaag
cttgtagttccagagatatatgacattgcaattcaggtttcaaagctgatggtaaatagt
cagttggaatcaatccgcaagaaatgtaaacatatactgttgcaatttatggtccactat
acactttctgaaaaacgtttagagcaacatgtgaactttctgctggaaaatctgaggtat
gagtttccaactggaagagaagcagttcttgacatgcttcatgccctaatcttaaaattc
tcagaacctaatcttggcaagcagtctgttcttgaccagcagtcgcaaaaattgtttatt
caacttactgtctgtttgtccaatgaaactgatagaaaagtgctgcccttggttggtgct
gtgatagaagttctgataggccgcatgagtaaagatcaagttgattccagtctcttgtac
tgtttgtgttggtataagcagcagaacttaagtgctgcggcggcacaggtattgggattt
tttatcagcgccatgaagaaaacatttcggaagcatatctacaatacagtggaggatgct
agaactattttggagtctgcaattagtgcttccagcttacagttgcaagatactgttgag
gaagccagtcttccgttctggaaggaagcatactactcactggttatgatagaaaagatg
ctagagcaatttcctgatttaagattcggaaaagatttagagaggtctccagctagaaaa
attactgctctagctttatcagcatctatcactaccttggacttagatatttggaaaatg
gtgtttaagttcttgttgcacccacacgcatggttgcgaaataaatcctgcaggctcctg
aatctttattttgaggcattagctgggagaaaaagaccagaatgtcgtacattagtagcg
gattctctcctagagaagccaagtagtctgttcatggtggctgtttctctttgcttccag
ttaaaggagcaacccaccacgggcaacattgatgttgatctcctcacagcaaatattgtt
tttgcggtctctagtcttcattctctgattggacaatttgatcaggcaacccacaatcgg
ttctggtccagtcttggtgaggatgagcaagtggtattcctcaaagcctttgaagtgctt
gatgcagggaaagggaggtctacttttttggctcttacctcaggcaaacgtactgagaat
ggtgatgatgatgtaagaaatgtaatgatcggaagtttgctcaaaagaatggggaagatt
gctcttgatatggagtctgttcagatgagagttatgttcaacgtctataaatcttttgcc
tcacaattgaatcaagaagaatgtcgcttatatgcctacaaaattctgcttccgttgtac
aaagtctgcgaaggatatacgggaaaaatcgtcacagatgagttgaaacagctagcagaa
gaggtacgagacagtataagggacaagagtttaggcaacaaaatgtttgtggaagtatac
agtgaaataagaaacagtttgagaacgaaaagagacaagagaaagcgagaagagaagcta
atggcagtggtaaatccggagagaaacgccaagaggaaactgaggttggcttcaaagaat
aaagcaaacaagaaaaggagaatgacgagcatgaaattgtctagatgggcttgctcttga
DBGET
integrated database retrieval system