Arabidopsis thaliana (thale cress): AT4G32380
Help
Entry
AT4G32380 CDS
T00041
Name
(RefSeq) pectin lyase superfamily protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Module
ath_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT4G32380
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
AT4G32380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
829373
NCBI-ProteinID:
NP_001320113
TAIR:
AT4G32380
UniProt:
A0A654FUU4
F4JUA6
LinkDB
All DBs
Position
4:15632712..15635494
Genome browser
AA seq
453 aa
AA seq
DB search
MGFEILLSVLLIASYHLQYGNGRMILTMKDFISNSNSTNVDHSQAFQNAWRALCGGKGGS
ASFVIQAHETYTIQPQLLEGPCMPRNIHIQIDGTIEAPKMANDWGRNKLDCWLCFEKVTG
LVLTGSGVLNTHGESWWSSVALQSRPVAVRFFGCQNILYNGLTQINSPRNHITILDSNNA
TLSNLHLIAPASSPNTDGIDISHSQNINIMSSTIKTGDDCVAIKRNSYNINVTYVTCGPG
HGISIGSLGEGGASEVVQNVNVRHCTFTGTQNGARIKTWPGGQGFVKNILYEDITLINAN
FPIIIDQQYRDNAGQYKQSAGATAVKVSDVTFRSFTGTCAAPIAIKLDCDPNTGCDNIVM
EQINIASSSPKTPLTSYCKFAHVVSRFVSIPITCSFHTEDSQPASLNPQPSAPYAISPTT
PHTQPHAPTTQPPLFFRFYTNFKAFLGRLGRNC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgagatactgctctcagtgcttctaattgcatcataccatttacagtacgga
aatggtcgaatgattctaaccatgaaagattttatatctaattctaactctacaaatgtt
gatcattctcaggcatttcaaaacgcatggagagcgttatgtggagggaaaggtggatca
gcctcgtttgtaatacaagcccatgaaacatataccatacaaccacaattgcttgaaggt
ccttgcatgcctcgtaatattcatattcagattgatggaacaattgaagctccgaagatg
gcaaacgactggggaaggaataaacttgactgttggttatgttttgaaaaggtgacaggc
ctcgttctcactggatccggtgtcctcaatacccatggagaaagctggtggtcttctgtt
gctctccaatctcgaccagtggcagtaagattttttggatgccaaaacattttatataat
ggattaactcagatcaatagtccaaggaatcacataacgattttggatagcaacaacgca
actttatcaaatcttcatctaattgcccctgcaagtagtccaaatactgatggcattgat
atctctcattcacaaaatatcaatattatgagctccacaatcaaaaccggtgatgactgt
gttgcaattaaacgtaattcatacaatattaacgtaacttacgtgacatgtggtccgggt
catggcataagtatcggaagtttgggggaaggaggggcatctgaggtagtacaaaatgtg
aatgtcagacattgcaccttcactggaacacaaaatggtgcaagaatcaagacttggcct
ggaggacaagggtttgtcaaaaatattttgtacgaagatattactctaataaatgccaac
ttccccatcatcatcgatcaacaatatcgtgataatgctggtcaatataaacaatcagca
ggggctactgctgtgaaagtgagcgacgtgacgtttagatcattcacagggacttgtgcc
gctcctattgcaataaaactagattgtgacccgaatacaggttgtgacaacatcgtgatg
gaacaaatcaatatcgcttcttcatctccgaaaacgccgctcacctcgtactgcaaattt
gcgcatgtcgttagtcgctttgtctccattcccataacctgtagttttcatactgaagat
tctcaacctgcgtcactgaatcctcaaccttccgcaccgtatgctatatccccgacgaca
ccgcatactcagcctcatgcaccaactactcaacctccactgttctttcgtttctataca
aatttcaaagccttcttaggaaggttgggtcgtaactgctag
DBGET
integrated database retrieval system
