Arabidopsis thaliana (thale cress): AT4G32520
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Entry
AT4G32520 CDS
T00041
Symbol
SHM3
Name
(RefSeq) serine hydroxymethyltransferase 3
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00260
Glycine, serine and threonine metabolism
ath00460
Cyanoamino acid metabolism
ath00630
Glyoxylate and dicarboxylate metabolism
ath00670
One carbon pool by folate
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
ath01200
Carbon metabolism
ath01230
Biosynthesis of amino acids
ath01240
Biosynthesis of cofactors
ath04981
Folate transport and metabolism
Module
ath_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AT4G32520 (SHM3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AT4G32520 (SHM3)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AT4G32520 (SHM3)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AT4G32520 (SHM3)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AT4G32520 (SHM3)
Enzymes [BR:
ath01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AT4G32520 (SHM3)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
829387
NCBI-ProteinID:
NP_567895
TAIR:
AT4G32520
UniProt:
Q94JQ3
A0A178UTK1
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Position
4:complement(15689436..15692989)
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AA seq
529 aa
AA seq
DB search
MQACCGGNSMASLQQPGRVQGSVFPPIMPPVTKFSQQLKFNISKPFRSSFLKRNLVSEMR
ASSVSLPNVEISSKEIPFEDYGLGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVME
AVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPA
NFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDY
DMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVAD
PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGL
AVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGAR
VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEIT
MEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPGV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttgttgtggtggtaattcgatggcttctcttcagcaacctggacgggttcaa
ggatctgtctttcccccaattatgcctccagtgaccaaattttctcagcagttgaagttc
aatatttcaaaacctttccgttcttcatttctgaaaagaaacctggtctctgaaatgaga
gcatcttcagtctcgctacctaatgtcgagataagcagcaaagaaatcccttttgaggac
tatggtcttggtgaagttgatccagaggtccgaaccatcatcacaaaggagaaagataga
caattcaggagcttggagcttattgcatctgagaatttcacgtctcgagcagttatggag
gcggttggctcatgccttaccaacaagtattctgagggactgcctggtaaaagatattat
ggtggcaatgagtacattgatcagttggagacgctttgccagaaccgggctttggcagcc
ttccgcttagattctacgaaatggggggttaatgttcagccgttatctggttcacctgca
aactttgctgtctacactgcgatacttagccctcatgatcggatcatgggtttggattta
cctcacggtggtcatctgtcgcatgggttcatgaccgctaaaaggcgtgtatctggaact
tcaatatactttgagtccatgccttatcgacttgatgaatcaacaggcattgttgactac
gatatgctcgagaaaactgctacacttttcagaccaaagcttattatcgcaggagctagt
gcatacagccgagattttgactatcctcgcatgaggaagatcgcagactcagttggtgct
tttctgatgatggatatggctcatatcagtgggcttgtggctgcttctgtggtagctgac
ccttttgagtattgtgatattgttacaacaacaactcacaagtctttgagaggtccgaga
ggtggcatgatcttcttcaggaaggatccaattaatggggttgatcttgaatctgccgtg
aacaatgctgtcttccctggtttgcagggtggccctcataaccacacaattggaggatta
gcagtctgcttgaaacacgcacaatcaccggaattcaaggcgtaccagaaaagagttgtg
tctaactgtagagctctagctaaccgattggttgaactcgggtttaagctagtttctggt
ggcagcgataaccacttggttctcgtcgatcttagacccatgggtatggatggtgcgcgg
gttgagaaaatcttagacatggcatctattactctcaacaagaactctgtccctggggac
aaaagtgcgttggtaccagggggaataaggataggatcccccgcgatgacgacaagagga
ctgtcagagaaagactttgtagtagtggctgacttcatcaaggaaggtgtggagataaca
atggaagccaagaaagccgcgccgggttcaaagcttcaagatttcaacaagttcgtgaca
tctcctgagtttccattgaaagagagagtgaagagtctaaaggagagagtggaaaccttc
acatctcgttttcccattcctggcgtttaa
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