Arabidopsis thaliana (thale cress): AT4G32910
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Entry
AT4G32910 CDS
T00041
Name
(RefSeq) nuclear pore complex Nup85-like protein
KO
K14304
nuclear pore complex protein Nup85
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT4G32910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT4G32910
03036 Chromosome and associated proteins [BR:
ath03036
]
AT4G32910
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AT4G32910
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AT4G32910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
829427
NCBI-ProteinID:
NP_567908
TAIR:
AT4G32910
UniProt:
Q8RXH2
A0A178V2H2
LinkDB
All DBs
Position
4:15881245..15885518
Genome browser
AA seq
716 aa
AA seq
DB search
MPGMSSESGGGELVLFSTKEKTPVLYPLSYGLKSPVHRLSISWGCGNNLRVTVLRNPELR
DDDDGEVGGKVVNVRLSGEDGEISDPQWRRIAYGSVSPFALLQSRRNSISSLSKMDMSSS
LYQTAWWEYVMEYSRDIKSLLSNTISLPAPLIEDPRSVIKNAEEPTSLKAAWELMELFYA
DKTCLSWLPERLVDWLSEYDILLSSSHPTIYSKLQDFQKELVGLQAIEDDPRYWEVMASA
LSVGWLEIVVKLLHLHGSYQLDQLGHRETENGLVEAVAVLISKMPRMRPQLEDGKFGECS
AAKPDFMKTRERWQSQITKLECSAFWVQCAHHQTREGLRNMLKIMIGNADCLRAATCNWM
ELFVSHLLYLRPFTKGLDGMHSLAQKCVQSKPVNTSHKLLRLLIGILGENTEVVLAECSK
EFGSWMVAHAMELLTAGSEEGEVLVHEEQRKLGGINMEELHRLVYAQVLSSHALTWQIAP
IYLASCEKQGLGLLELLFYRQPVQENQMLIKSLEICRLYELSNVSAKLMKISGVHHWKHG
RKGSGIFWLQQARDENCLSVIAQQLFDSVGKSLSDESLKQWEGLVELLGSESQISGGLDF
LHKYRDFKRSLKVVHDGKTIDAAHEAVERLVSLMKSPSTPQRFWLPLLHDSLKLLNWPER
SLLNVTQTNLMLNKLQELSIARLRPGFIESELSAQAVGSVRLALATNLGRAFLEEC
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtatgtcttcggaatctggcggtggagaattggttctgttttcgaccaaggaa
aaaactccggtgttgtatcctctaagctatggcctcaagtctccggttcacaggctctcc
atctcctggggttgcggaaacaacctacgcgtcacggttttaaggaatccagagttacgc
gatgatgacgacggagaagttggtggtaaggtcgtaaacgttaggcttagcggcgaggat
ggcgaaatcagtgacccacagtggcgaaggatcgcttatggatcggtatctccgttcgcg
cttttgcagagcagaagaaactcaatttccagtttgtctaagatggatatgagttcctct
ctgtatcagactgcgtggtgggagtacgtaatggaatacagcagagatattaaatctctc
cttagtaatacaatatctttgcccgctcctttgattgaagacccgagatcagttataaag
aatgctgaggaaccaacttctttaaaggctgcgtgggagttgatggaattattttatgca
gataagacatgtctgtcttggttgccagaacggctcgttgattggttatctgaatacgat
atactcctttctagctcacatccaacaatctactcaaagctccaggatttccaaaaggaa
cttgttggcctgcaggccatcgaggatgatccaagatactgggaagtgatggcttctgct
ttatcagttggttggctagaaatagtggtgaagttgttacacctacatggttcttatcaa
ctagaccagctgggacatcgtgagacagaaaatggtttggtagaagcggttgctgttctc
atttcaaaaatgccacgaatgcggccacaactagaagatgggaaatttggtgaatgctct
gcagcaaagcctgactttatgaagacacgagaaagatggcagtctcagataactaaacta
gagtgcagtgccttctgggttcaatgtgctcaccatcagacccgtgagggcttgagaaat
atgttgaagatcatgataggaaatgctgattgcctcagagctgcgacatgtaactggatg
gagctttttgtttcacatcttctttatctcaggccatttacgaagggattagatggcatg
catagcctagcccagaagtgtgttcagtcaaagccagttaacacttcccataagcttcta
agactgcttattggaattcttggagaaaatactgaggttgttctggcagagtgttccaaa
gaatttggctcctggatggttgcacatgccatggaattattgacagctggaagcgaagaa
ggagaagttcttgtacatgaggaacagcgtaagttgggtggaattaacatggaagagctc
catagacttgtttatgctcaagttctttcttctcatgctttgacttggcagatagctcct
atttatctagcatcgtgcgagaaacagggattaggcttattagagctgttgttctacagg
cagcctgttcaagagaatcagatgcttattaagagcctagagatttgccgtctctatgaa
ctcagtaatgtcagtgctaaactaatgaagatttctggagtgcatcattggaaacatggg
aggaaaggctcagggattttctggctccagcaagctcgggacgaaaattgtctcagcgtg
attgctcaacagctgtttgattctgttggaaaatcattgtctgatgaaagtctcaagcaa
tgggaaggcctagtcgagttgctgggttcggaatcacagatctctggtggtctcgatttt
cttcacaagtatagagatttcaagagatcgctgaaggtagtccatgatggaaaaactata
gatgcagctcatgaagccgtagagagacttgtatcgctaatgaagagcccttctactcct
caacgcttctggcttcctcttctgcatgattcattgaagctgttgaattggcccgaacgt
tcgctgttgaatgtaacacagaccaacctgatgttgaacaaattacaagagctatcaata
gcaaggttaagaccaggcttcatagaatctgagttgtctgctcaagctgtgggttcagtg
agacttgctctagcaacaaatctcggacgtgcttttctcgaagaatgttag
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