KEGG   Arabidopsis thaliana (thale cress): AT4G34470
Entry
AT4G34470         CDS       T00041                                 
Symbol
SK12
Name
(RefSeq) SKP1-like 12
  KO
K03094  S-phase kinase-associated protein 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03083  Polycomb repressive complex
ath04120  Ubiquitin mediated proteolysis
ath04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT4G34470 (SK12)
   04120 Ubiquitin mediated proteolysis
    AT4G34470 (SK12)
  09126 Chromosome
   03083 Polycomb repressive complex
    AT4G34470 (SK12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT4G34470 (SK12)
   04121 Ubiquitin system [BR:ath04121]
    AT4G34470 (SK12)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT4G34470 (SK12)
Membrane trafficking [BR:ath04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    AT4G34470 (SK12)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     AT4G34470 (SK12)
   Cul7 complex
     AT4G34470 (SK12)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     AT4G34470 (SK12)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     AT4G34470 (SK12)
SSDB
Motif
Pfam: Skp1 Skp1_POZ Peptidase_C30 SPA
Other DBs
NCBI-GeneID: 829598
NCBI-ProteinID: NP_567967
TAIR: AT4G34470
UniProt: O65674
LinkDB
Position
4:complement(16480008..16480616)
AA seq 152 aa
MSSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCK
KYHVDEANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGK
TPEEIRSTFNIENDFTPEEEEAVRKENQWAFE
NT seq 459 nt   +upstreamnt  +downstreamnt
atgtcttcgaagatgatcgtgttgatgagctccgatggtcagtcgtttgaggtggaagaa
gcggtagcaatccaatcgcagaccatagcgcatatggttgaagacgattgcgttgctgat
ggaatccctcttgcaaacgtggaaagcaagattcttgtgaaagtgatcgagtactgcaag
aaataccacgtcgacgaggctaatcctatctctgaagaggatctcaacaagtgggacgag
aagttcatggatctcgaacaatccaccatctttgaactcatccttgctgcgaattacctc
aacataaaaagcttgtttgatctcacatgccaaactgttgcggacatgatcaaaggcaag
actccagaggagattcgttcaactttcaacattgagaatgattttacacctgaggaagaa
gaagctgttcgtaaggagaatcaatgggcttttgaatga

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