Arabidopsis thaliana (thale cress): AT4G35050
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Entry
AT4G35050 CDS
T00041
Symbol
MSI3
Name
(RefSeq) Transducin family protein / WD-40 repeat family protein
KO
K10752
histone-binding protein RBBP4
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03082
ATP-dependent chromatin remodeling
ath03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AT4G35050 (MSI3)
03083 Polycomb repressive complex
AT4G35050 (MSI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT4G35050 (MSI3)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
AT4G35050 (MSI3)
Histone modification proteins
HAT complexes
HATB complex
AT4G35050 (MSI3)
HDAC complexes
Sin3A-HDAC complex
AT4G35050 (MSI3)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
AT4G35050 (MSI3)
PRC2.2
AT4G35050 (MSI3)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
AT4G35050 (MSI3)
Heterochromatin formation proteins
Other heterochromatin formation proteins
AT4G35050 (MSI3)
Chromatin remodeling factors
NuRD complex
AT4G35050 (MSI3)
NuRF complex
AT4G35050 (MSI3)
NuRF complex (fruit fly)
AT4G35050 (MSI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_SCAP
WD40_RFWD3
ANAPC4_WD40
MIOS_WD40
Beta-prop_WDR75_1st
eIF2A
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
829657
NCBI-ProteinID:
NP_195231
TAIR:
AT4G35050
UniProt:
O22469
Q5HZ33
A0A5S9Y0Y7
LinkDB
All DBs
Position
4:complement(16682580..16684928)
Genome browser
AA seq
424 aa
AA seq
DB search
MAAEEGKDEAGLDQVEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPY
FAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEV
NRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSF
KEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDD
CQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHV
LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH
GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDDDEGNQNAQHSN
ENQK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaagagggtaaagatgaggcgggattggatcaggtggaagaagagttctct
atttggaaaaggaacacaccttttctctacgatcttatgatctctcacccactagaatgg
ccttctcttactctccactgggttccttcgacgccgattccgtactcgaaagatccttac
tttgccgtccataagcttatccttgggactcatacctccggtggtgcccaagattttcta
atggtcgccgatgtcgttattccgacacccgacgctgaaccaggattaggtggaagagat
caggaacctatcgtccctaaggtggagattaagcagaagatacgtgttgatggagaagtg
aacagagcgaggtgtatgccacaaaagccaactcttgtgggtgctaaaacaagtggctct
gaggtgtttctgtttgattacgccagactctctggaaagccccaaacaagtgagtgtgat
cctgatctgaggctaatgggacatgaacaagaaggttatggattggcttggagttccttt
aaggagggttatcttttgagtggctcacaagatcagagaatctgcctttgggatgtctca
gcgactgccactgataaagttttgaacccaatgcatgtgtatgagggacatcaaagtatc
atcgaagatgtagcatggcacatgaagaatgaaaacatattcgggtctgcgggtgatgat
tgtcaattggtgatatgggacttacggactaaccaaatgcaacaccaagtcaaagttcac
gagagagagataaactatctttctttcaatcccttcaatgaatgggtactagccacagct
tcctcagactcaactgtcgccttgtttgaccttcgtaagctgactgcgccattacatgtc
ctgagcaaacacgagggagaagttttccaagtggagtgggatcccaaccatgaaacagtg
cttgcatcttctggcgaggacagaagactcatggtctgggatatcaacagggttggggat
gagcagcttgaaatagagttggatgcagaagatggtccacctgagctgctcttctctcat
ggaggccacaaggccaagatatcagactttgcctggaacaaggacgagccttgggtcatc
tcaagtgtagctgaagacaacagtcttcaagtctggcaaatggcggaaagcatctaccgc
gaagatgacgaggatgaggatgatgatgatgaaggcaaccaaaatgcacaacattccaat
gaaaaccagaaatga
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integrated database retrieval system
