Arabidopsis thaliana (thale cress): AT4G35370
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Entry
AT4G35370 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K14791
periodic tryptophan protein 1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT4G35370
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
90S particles
Other 90S particles
AT4G35370
Pre-60S particles
Other pre-60S particles
AT4G35370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
WD40
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
DSE1_N
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
EIF3I
WD40_RFWD3
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
PAC11
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_WDR75_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_DCAF12
ASA1
Beta-prop_SCAP
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
829690
NCBI-ProteinID:
NP_195263
TAIR:
AT4G35370
UniProt:
F4JN04
LinkDB
All DBs
Position
4:16815138..16817544
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AA seq
433 aa
AA seq
DB search
MTIVALSWIPKEASKAMPVAAESPCMEEKMDDEIQNAQVTHAKSVAKSFGKSKVASSSST
DADEVVKFLKELDMDNYDEEDDEIELFSSGQGHLYYPSNDMDPYLKDTDGDYDSEDHDDL
TIRPTDSLIICAAIKHEVNYLEVYVYEESENIYLRNDMIISELPLCTAWLDCPLKGGGKG
NFVAIGTMESSIEIWDLDLVCTCATLCTTGTDNSHTGPVIDLAWNKEFRNIVASGSEDKK
VKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLKWS
TEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAP
NLLATGSADESVKLWDLSNNQPSWIATNKPNAGEVFSVSFSADCPFLLAVGGSEGLNVSV
GYLIRHCCVPKIW
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagttgcactttcatggatcccaaaagaggcatcaaaggctatgcctgttgct
gctgaatctccttgtatggaagaaaagatggacgatgaaattcagaatgctcaagttact
catgccaagtctgtagcaaaatcttttgggaaaagcaaggttgcttcttcttcttcaaca
gatgctgatgaagttgtcaagttcttgaaagaactcgacatggataactatgatgaagag
gatgatgagattgaactgtttagctctgggcagggacacctttattatccaagcaatgac
atggatccatacctaaaggatactgacggtgactatgactcagaggatcacgatgacttg
acaattaggccaaccgattcactgatcatctgtgctgctattaaacatgaagtcaactat
ctcgaggtttatgtatatgaggaatccgaaaacatttatcttcgcaatgacatgattata
tccgagcttccattgtgcacagcatggcttgattgtcctctcaaaggagggggaaaaggg
aactttgtagctatcgggacaatggagtcctctatagagatatgggatcttgaccttgta
tgtacttgtgctaccttgtgtacaactgggacggataattcccacactggtccagtaatt
gatcttgcttggaacaaggagtttcggaatatagttgctagtggtagtgaagacaaaaaa
gtgaaggtttgggatgtggctacggggaaatgcaaggttactatggagcatcacgaaaag
aaggttcacgcggttgcatggaacaattatactccagaagtactcctcagtgggtctcgt
gatcgtactgtagtattgaaagatggaagggacccttcaaactcgggtttgaaatggtct
accgaggccaaagtcgaaaaattggcttgggatcctcacagcgaacactcctttgtggtg
agtctcaaagatggaactgtgaagggctttgatacacgtgcttctgatttatcaccaagt
ttcattatccatgctcatgatagtgaagtctcctccatatcatacaacatacatgccccc
aatcttttggctacgggatctgcggatgaaagtgtgaaactttgggatctttcaaacaac
caaccatcatggattgctacaaacaagccaaatgctggagaagttttctcggtctcattc
tcagcggactgccccttcttactcgctgttggtggctcagaggggctaaatgtaagtgtg
ggataccttatcagacactgctgtgtcccgaagatatggtag
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